Biofilms: hot spots of horizontal gene transfer (HGT) in aquatic environments, with a focus on a new HGT mechanism

被引：278

作者：

Abe, Kimihiro ^{[1
]}

Nomura, Nobuhiko ^{[1
,2
]}

Suzuki, Satoru ^{[3
]}

机构：

[1] Univ Tsukuba, Fac Life & Environm Sci, Tsukuba, Ibaraki 3058577, Japan

[2] Univ Tsukuba, Microbiol Res Ctr Sustainabil, Tsukuba, Ibaraki 3058577, Japan

[3] Ehime Univ, Ctr Marine Environm Studies, Sci Bld 2, Matsuyama, Ehime 7908577, Japan

来源：

FEMS MICROBIOLOGY ECOLOGY | 2020年 / 96卷 / 05期

关键词：

antibiotic resistance gene; horizontal gene transfer; membrane vesicle; biofilm; water environment; ANTIBIOTIC-RESISTANCE GENES; MEMBRANE-VESICLE FORMATION; PLASMID TRANSFER; BACILLUS-SUBTILIS; WASTE-WATER; STREPTOCOCCUS-PNEUMONIAE; BACTERIOPHAGE FRACTIONS; EXTRACELLULAR VESICLES; NATURAL TRANSFORMATION; ESCHERICHIA-COLI;

D O I：

10.1093/femsec/fiaa031

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Biofilms in water environments are thought to be hot spots for horizontal gene transfer (HGT) of antibiotic resistance genes (ARGs). ARGs can be spread via HGT, though mechanisms are known and have been shown to depend on the environment, bacterial communities and mobile genetic elements. Classically, HGT mechanisms include conjugation, transformation and transduction; more recently, membrane vesicles (MVs) have been reported as DNA reservoirs implicated in interspecies HGT. Here, we review the current knowledge on the HGT mechanisms with a focus on the role of MVs and the methodological innovations in the HGT research.

引用

页数：12

共 144 条

[1] A novel non prophage(-like) gene-intervening element within gerE that is reconstituted during sporulation in Bacillus cereus ATCC10987 [J].

Abe, Kimihiro ;

Shimizu, Shin-ya ;

Tsuda, Shuhei ;

Sato, Tsutomu .

SCIENTIFIC REPORTS, 2017, 7

[2] Mechanism of bacterial gene rearrangement: SprA-catalyzed precise DNA recombination and its directionality control by SprB ensure the gene rearrangement and stable expression of spsM during sporulation in Bacillus subtilis [J].

Abe, Kimihiro ;

Takamatsu, Takuo ;

Sato, Tsutomu .

NUCLEIC ACIDS RESEARCH, 2017, 45 (11) :6669-6683

[3] Developmentally-Regulated Excision of the SPb Prophage Reconstitutes a Gene Required for Spore Envelope Maturation in Bacillus subtilis [J].

Abe, Kimihiro ;

Kawano, Yuta ;

Iwamoto, Keito ;

Arai, Kenji ;

Maruyama, Yuki ;

Eichenberger, Patrick ;

Sato, Tsutomu .

PLOS GENETICS, 2014, 10 (10)

[4] Regulated DNA rearrangement during sporulation in Bacillus weihenstephanensis KBAB4 [J].

Abe, Kimihiro ;

Yoshinari, Akira ;

Aoyagi, Takahiro ;

Hirota, Yasunori ;

Iwamoto, Keito ;

Sato, Tsutomu .

MOLECULAR MICROBIOLOGY, 2013, 90 (02) :415-427

[5] DNA-uptake pili of Vibrio cholerae are required for chitin colonization and capable of kin recognition via sequence-specific self-interaction [J].

Adams, David W. ;

Stutzmann, Sandrine ;

Stoudmann, Candice ;

Blokesch, Melanie .

NATURE MICROBIOLOGY, 2019, 4 (09) :1545-1557

[6] Proteomic analysis of Vibrio cholerae outer membrane vesicles [J].

Altindis, Emrah ;

Fu, Yang ;

Mekalanos, John J. .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (15) :E1548-E1556

[7] Horizontal gene exchange in environmental microbiota [J].

Aminov, Rustam I. .

FRONTIERS IN MICROBIOLOGY, 2011, 2

[8] Functional metagenomic analysis reveals rivers are a reservoir for diverse antibiotic resistance genes [J].

Amos, G. C. A. ;

Zhang, L. ;

Hawkey, P. M. ;

Gaze, W. H. ;

Wellington, E. M. .

VETERINARY MICROBIOLOGY, 2014, 171 (3-4) :441-447

[9] PLASMID TRANSFER BETWEEN MARINE-BACTERIA IN THE AQUEOUS PHASE AND BIOFILMS IN REACTOR MICROCOSMS [J].

ANGLES, ML ;

MARSHALL, KC ;

GOODMAN, AE .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1993, 59 (03) :843-850

[10] Microplastic pollution increases gene exchange in aquatic ecosystems [J].

Arias-Andres, Maria ;

Kluemper, Uli ;

Rojas-Jimenez, Keilor ;

Grossart, Hans-Peter .

ENVIRONMENTAL POLLUTION, 2018, 237 :253-261

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