Characterization of the complete chloroplast genome of a Peruvian landrace of Capsicum chinense Jacq. (Solanaceae), arnaucho chili pepper

被引：1
|
作者：
Arbizu, Carlos, I [1 ]
Saldana, Carla L. [1 ]
Ferro-Mauricio, Ruben D. [1 ]
Chavez-Galarza, Julio C. [1 ]
Herrera, Jordan [1 ]
Contreras-Liza, Sergio [2 ]
Guerrero-Abad, Juan C. [3 ]
Maicelo, Jorge L. [1 ]
机构：
[1] Inst Nacl Innovac Agr INIA, Direcc Desarrollo Tecnol Agr, Lima, Peru
[2] Univ Nacl Jose Faustino Sanchez Carrion, Fac Ingn Agr Ind Alimentarias & Ambiental, Lima, Peru
[3] Inst Nacl Innovac Agr INIA, Direcc Recursos Genet & Biotecnol, Lima, Peru
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2022年 / 7卷 / 01期
关键词：
NGS; chloroplast; genetic resources; arnaucho; phylogenomics; SEQUENCE;
D O I：
10.1080/23802359.2021.2014366
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
In this study, we sequenced the first complete chloroplast (cp) genome of a Peruvian chili pepper landrace, "arnacucho" (Capsicum chinense). This cp genome has a 156,931 bp in length with typical quadripartite structure, containing a large single copy (LSC) region (87,325 bp) and a 17,912 bp small single-copy (SSC) region, separated by two inverted repeat (IR) regions (25,847 bp); and the percentage of GC content was 37.71%. Arnaucho chili pepper chloroplast genome possesses 133 genes that consists of 86 protein-coding genes, 37 tRNA, eight rRNA, and two pseudogenes. Phylogenetic analysis revealed that this Peruvian chili pepper landrace is closely related to the undomesticated species C. galapagoense; all belong to the Capsiceae tribe.
引用
收藏
页码：156 / 158
页数：3
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