Comparison of small RNA next-generation sequencing with and without isolation of small RNA fraction

被引:0
作者
Nagy, Tibor [1 ,3 ]
Kis, Andras [1 ]
Poliska, Szilard [2 ]
Barta, Endre [1 ]
Havelda, Zoltan [1 ]
Marincs, Ferenc [1 ]
机构
[1] Natl Agr Res & Innovat Ctr, Agr Biotechnol Inst, Szent Gyorgyi Albert U 4, Godollo, Hungary
[2] Univ Debrecen, Fac Med, Dept Biochem & Mol Biol, Genom Med & Bioinformat Core Facil, Debrecen, Hungary
[3] Wellcome Trust Sanger Inst, Cambridge, England
关键词
wheat; miRNA; Illumina sequencing; library preparation; MICRORNAS;
D O I
暂无
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:273 / 278
页数:4
相关论文
共 50 条
[21]   Small RNA Transcriptomes of Two Types of Exosomes in Human Whole Saliva Determined by Next Generation Sequencing [J].
Ogawa, Yuko ;
Taketomi, Yoshitaka ;
Murakami, Makoto ;
Tsujimoto, Masafumi ;
Yanoshita, Ryohei .
BIOLOGICAL & PHARMACEUTICAL BULLETIN, 2013, 36 (01) :66-75
[22]   Next-generation sequencing library preparation method for identification of RNA viruses on the Ion Torrent Sequencing Platform [J].
Chen, Guiqian ;
Qiu, Yuan ;
Zhuang, Qingye ;
Wang, Suchun ;
Wang, Tong ;
Chen, Jiming ;
Wang, Kaicheng .
VIRUS GENES, 2018, 54 (04) :536-542
[23]   Next-generation sequencing library preparation method for identification of RNA viruses on the Ion Torrent Sequencing Platform [J].
Guiqian Chen ;
Yuan Qiu ;
Qingye Zhuang ;
Suchun Wang ;
Tong Wang ;
Jiming Chen ;
Kaicheng Wang .
Virus Genes, 2018, 54 :536-542
[24]   Biases in small RNA deep sequencing data [J].
Raabe, Carsten A. ;
Tang, Thean-Hock ;
Brosius, Juergen ;
Rozhdestvensky, Timofey S. .
NUCLEIC ACIDS RESEARCH, 2014, 42 (03) :1414-1426
[25]   Test of Small RNA Sequencing Repeatability in Rice [J].
Sun Hong-zheng ;
Peng Ting ;
Zhang Jing ;
Li Jun-zhou ;
Du Yan-xiu ;
Zhao Quan-zhi .
RICE SCIENCE, 2017, 24 (01) :56-60
[26]   Small RNA Sequencing across Diverse Biofluids Identifies Optimal Methods for exRNA Isolation [J].
Srinivasan, Srimeenakshi ;
Yeri, Ashish ;
Cheah, Pike See ;
Chung, Allen ;
Danielson, Kirsty ;
De Hoff, Peter ;
Filant, Justyna ;
Laurent, Clara D. ;
Laurent, Lucie D. ;
Magee, Rogan ;
Moeller, Courtney ;
Murthy, Venkatesh L. ;
Nejad, Parham ;
Paul, Anu ;
Rigoutsos, Isidore ;
Rodosthenous, Rodosthenis ;
Shah, Ravi, V ;
Simonson, Bridget ;
To, Cuong ;
Wong, David ;
Yan, Irene K. ;
Zhang, Xuan ;
Balaj, Leonora ;
Breakefield, Xandra O. ;
Daaboul, George ;
Gandhi, Roopali ;
Lapidus, Jodi ;
Londin, Eric ;
Patel, Tushar ;
Raffai, Robert L. ;
Sood, Anil K. ;
Alexander, Roger P. ;
Das, Saumya ;
Laurent, Louise C. .
CELL, 2019, 177 (02) :446-+
[27]   Expression Profiling of lncRNAs, miRNAs, and mRNAs and Their Differential Expression in Leiomyoma Using Next-Generation RNA Sequencing [J].
Chuang, Tsai-Der ;
Khorram, Omid .
REPRODUCTIVE SCIENCES, 2018, 25 (02) :246-255
[28]   Evaluation of serum extracellular vesicle isolation methods for profiling miRNAs by next-generation sequencing [J].
Buschmann, Dominik ;
Kirchner, Benedikt ;
Hermann, Stefanie ;
Maerte, Melanie ;
Wurmser, Christine ;
Brandes, Florian ;
Kotschote, Stefan ;
Bonin, Michael ;
Steinlein, Ortrud K. ;
Pfaffl, Michael W. ;
Schelling, Gustav ;
Reithmair, Marlene .
JOURNAL OF EXTRACELLULAR VESICLES, 2018, 7 (01)
[29]   Next-Generation Sequencing in Cancer [J].
Nair, S. Vinod ;
Madhulaxmi ;
Thomas, Gigi ;
Ankathil, Ravindran .
JOURNAL OF MAXILLOFACIAL & ORAL SURGERY, 2021, 20 (03) :340-344
[30]   Small RNA sequencing identifies miRNA roles in ovule and fibre development [J].
Xie, Fuliang ;
Jones, Don C. ;
Wang, Qinglian ;
Sun, Runrun ;
Zhang, Baohong .
PLANT BIOTECHNOLOGY JOURNAL, 2015, 13 (03) :355-369