Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene

被引:43
作者
Song, Cuiping [2 ,3 ]
Zhu, Chao [1 ]
Zhang, Chaofan [1 ]
Cui, Shangjin [1 ]
机构
[1] CAAS, Harbin Vet Res Inst, Div Swine Infect Dis, State Key Lab Vet Biotechnol, Harbin 150001, Peoples R China
[2] Ocean Univ China, Lab Marine Genet & Breeding MGB, Qingdao 266003, Peoples R China
[3] China Anim Hlth & Epidemiol Ctr, Qingdao 266032, Peoples R China
关键词
POLYMERASE-CHAIN-REACTION;
D O I
10.1186/1743-422X-7-353
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A TaqMan-based real-time polymerase chain reaction (PCR) assay was devised for the detection of porcine parvovirus (PPV). Two primers and a TaqMan probe for the non-structural protein NS1 gene were designed. The detection limit was 1 x 10(2) DNA copies/mu L, and the assay was linear in the range of 1 x 10(2) to 1 x 10(9) copies/mu L. There was no cross-reaction with porcine circovirus 2 (PCV2), porcine reproductive and respiratory syndrome virus (PRRSV), pseudorabies virus (PRV), classical swine fever virus (CSFV), or Japanese encephalitis virus (JEV). The assay was specific and reproducible. In 41 clinical samples, PPV was detected in 32 samples with the real-time PCR assay and in only 11 samples with a conventional PCR assay. The real-time assay using the TaqMan-system can therefore be practically used for studying the epidemiology and management of PPV.
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页数:4
相关论文
共 10 条
[1]   STRUCTURE AND REPLICATION OF MINUTE VIRUS OF MICE DNA [J].
ASTELL, CR ;
THOMSON, M ;
CHOW, MB ;
WARD, DC .
COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, 1982, 47 :751-762
[2]   A TaqMan-based real-time polymerase chain reaction for the detection of porcine parvovirus [J].
Chen, Hong-Ying ;
Li, Xiao-Kang ;
Cui, Bao-An ;
Wei, Zhan-Yong ;
Li, Xin-Sheng ;
Wang, Yan-Bin ;
Zhao, Li ;
Wang, Zhen-Ya .
JOURNAL OF VIROLOGICAL METHODS, 2009, 156 (1-2) :84-88
[3]   A comparison of virus isolation, polymerase chain reaction, immunohistochemistry, and in situ hybridization for the detection of porcine circovirus 2 and porcine parvovirus in experimentally and naturally coinfected pigs [J].
Kim, J ;
Chae, C .
JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION, 2004, 16 (01) :45-50
[4]  
Mengeling W L, 1991, J Vet Diagn Invest, V3, P33
[5]  
Mengeling WL, 2006, DIS SWINE, V93, P1400
[6]   PORCINE PARVOVIRUS - VIRUS PURIFICATION AND STRUCTURAL AND ANTIGENIC PROPERTIES OF VIRION POLYPEPTIDES [J].
MOLITOR, TW ;
JOO, HS ;
COLLETT, MS .
JOURNAL OF VIROLOGY, 1983, 45 (02) :842-854
[7]   Comparative analysis reveals frequent recombination in the parvoviruses [J].
Shackelton, Laura A. ;
Hoelzer, Karin ;
Parrish, Colin R. ;
Holmes, Edward C. .
JOURNAL OF GENERAL VIROLOGY, 2007, 88 :3294-3301
[8]   Detection of porcine parvovirus DNA by the polymerase chain reaction assay using primers to the highly conserved nonstructural protein gene, NS-1 [J].
Soares, RM ;
Durigon, EL ;
Bersano, JG ;
Richtzenhain, LJ .
JOURNAL OF VIROLOGICAL METHODS, 1999, 78 (1-2) :191-198
[9]   Real-time PCR protocol for the detection of porcine parvovirus in field samples [J].
Wilhelm, Sonja ;
Zimmermann, Pia ;
Selbitz, Hans Joachim ;
Truyen, Uwe .
JOURNAL OF VIROLOGICAL METHODS, 2006, 134 (1-2) :257-260
[10]   Study of the virulence and cross-neutralization capability of recent porcine parvovirus field isolates and vaccine viruses in experimentally infected pregnant gilts [J].
Zeeuw, E. J. L. ;
Leinecker, N. ;
Herwig, V. ;
Selbitz, H. -J. ;
Truyen, U. .
JOURNAL OF GENERAL VIROLOGY, 2007, 88 :420-427