Iron-Oxidizing Bacteria: An Environmental and Genomic Perspective

被引:577
作者
Emerson, David [1 ]
Fleming, Emily J. [1 ]
McBeth, Joyce M. [1 ]
机构
[1] Bigelow Lab Ocean Sci, W Boothbay Harbor, ME 04575 USA
来源
ANNUAL REVIEW OF MICROBIOLOGY, VOL 64, 2010 | 2010年 / 64卷
基金
美国国家科学基金会;
关键词
Fe-oxidizing bacteria; iron oxidation; Leptothrix; Gallionella; Mariprofundus; PHOTOTROPHIC FE(II) OXIDATION; RICH MICROBIAL MATS; HOT-SPOT AREAS; DE-FUCA RIDGE; LEPTOTHRIX-DISCOPHORA; LOIHI-SEAMOUNT; HYDROTHERMAL SULFIDE; STRUCTURAL-ANALYSIS; OXIDE DEPOSITS; OCHRE DEPOSITS;
D O I
10.1146/annurev.micro.112408.134208
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
In the 1830s, iron bacteria were among the first groups of microbes to be recognized for carrying out a fundamental geological process, namely the oxidation of iron Due to lingering questions about their metabolism, coupled with difficulties in culturing important community members, studies of Fe-oxidizing bacteria (FeOB) have lagged behind those of other important microbial lithotrophic metabolisms Recently, research on lithotrophic, oxygen-dependent FeOB that grow at circum-neutral pH has accelerated This work is driven by several factors including the recognition by both microbiologists and geoscientists of the role FeOB play in the biogeochemistry of iron and other elements The isolation of new strains of obligate FeOB allowed a better understanding of their physiology and phylogeny and the realization that FeOB are abundant at certain deep-sea hydrothermal vents These ancient microorganisms offer new opportunities to learn about fundamental biological processes that can be of practical importance
引用
收藏
页码:561 / 583
页数:23
相关论文
共 140 条
[21]   OXIDATION OF MANGANESE AND IRON BY LEPTOTHRIX-DISCOPHORA - USE OF N,N,N',N'-TETRAMETHYL-PARA-PHENYLENEDIAMINE AS AN INDICATOR OF METAL OXIDATION [J].
DEVRINDDEJONG, EW ;
CORSTJENS, PLAM ;
KEMPERS, ES ;
WESTBROEK, P ;
DEVRIND, JPM .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1990, 56 (11) :3458-3462
[22]   Low-oxygen and chemical kinetic constraints on the geochemical niche of neutrophilic iron(II) oxidizing microorganisms [J].
Druschel, Gregory K. ;
Emerson, David ;
Sutka, R. ;
Suchecki, P. ;
Luther, George W., III .
GEOCHIMICA ET COSMOCHIMICA ACTA, 2008, 72 (14) :3358-3370
[23]   Sorption of ferric iron from ferrioxamine B to synthetic and biogenic layer type manganese oxides [J].
Duckworth, Owen W. ;
Bargar, John R. ;
Sposito, Garrison .
GEOCHIMICA ET COSMOCHIMICA ACTA, 2008, 72 (14) :3371-3380
[24]  
Dzombak D.A., 1990, SURFACE COMPLEXATION
[25]   Geomicrobiology in oceanography: microbe-mineral interactions at and below the seafloor [J].
Edwards, KJ ;
Bach, W ;
McCollom, TM .
TRENDS IN MICROBIOLOGY, 2005, 13 (09) :449-456
[26]   Seafloor bioalteration of sulfide minerals: Results from in situ incubation studies [J].
Edwards, KJ ;
McCollom, TM ;
Konishi, H ;
Buseck, PR .
GEOCHIMICA ET COSMOCHIMICA ACTA, 2003, 67 (15) :2843-2856
[27]   Isolation and characterization of novel psychrophilic, neutrophilic, Fe-oxidizing, chemolithoautotrophic α- and, γ-Proteobacteria from the deep sea [J].
Edwards, KJ ;
Rogers, DR ;
Wirsen, CO ;
McCollom, TM .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2003, 69 (05) :2906-2913
[28]  
Ehrenberg G.C., 1837, Scientific memoirs, selected from the transactions of foreign Academies of Science and Learned Societies and from foreign journals, P400
[29]  
EHRLICH HL, 1991, VARIATIONS AUTOTROPH, P147
[30]   Enrichment and isolation of iron-oxidizing bacteria at neutral pH [J].
Emerson, D ;
Floyd, MM .
ENVIRONMENTAL MICROBIOLOGY, 2005, 397 :112-123