Molecular mechanism of energy conservation in polysulfide respiration

被引:131
作者
Jormakka, Mika [1 ,2 ,3 ]
Yokoyama, Ken [4 ,5 ]
Yano, Takahiro [5 ]
Tamakoshi, Masatada [6 ]
Akimoto, Satoru [5 ]
Shimamura, Tatsuro [7 ,8 ]
Curmi, Paul [1 ]
Iwata, So [8 ,9 ,10 ]
机构
[1] Univ New S Wales, Dept Biophys, Sydney, NSW 2052, Australia
[2] Univ Sydney, Centenary Inst Canc Med & Cell Biol, Struct Biol Program, Sydney, NSW 2042, Australia
[3] Univ Sydney, Fac Med, Cent Clin Sch, Sydney, NSW 2006, Australia
[4] Tokyo Inst Technol, Chem Resources Lab, Midori Ku, Yokohama, Kanagawa 2268503, Japan
[5] Japan Sci & Technol Agcy, ICORP ATP Synth Regulat Project, Koto Ku, Tokyo 1350064, Japan
[6] Tokyo Univ Pharm & Life Sci, Dept Biol Mol, Tokyo 1920392, Japan
[7] RIKEN SPring 8 Ctr, Struct Biophys Lab, Sayo, Hyogo 6795148, Japan
[8] Japan Sci & Technol Agcy, ERATO, Human Crystallog Project, Sakyo Ku, Kyoto 606851, Japan
[9] Univ London Imperial Coll Sci Technol & Med, Div Mol Biosci, Membrane Prot Crystallog Grp, London SW7 2AZ, England
[10] RIKEN Genom Sci Ctr, Yokohama, Kanagawa 2300045, Japan
基金
英国惠康基金;
关键词
D O I
10.1038/nsmb.1434
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Bacterial polysulfide reductase (PsrABC) is an integral membrane protein complex responsible for quinone-coupled reduction of polysulfide, a process important in extreme environments such as deep-sea vents and hot springs. We determined the structure of polysulfide reductase from Thermus thermophilus at 2.4-angstrom resolution, revealing how the PsrA subunit recognizes and reduces its unique polyanionic substrate. The integral membrane subunit PsrC was characterized using the natural substrate menaquinone-7 and inhibitors, providing a comprehensive representation of a quinone binding site and revealing the presence of a water-filled cavity connecting the quinone binding site on the periplasmic side to the cytoplasm. These results suggest that polysulfide reductase could be a key energy-conserving enzyme of the T. thermophilus respiratory chain, using polysulfide as the terminal electron acceptor and pumping protons across the membrane via a previously unknown mechanism.
引用
收藏
页码:730 / 737
页数:8
相关论文
共 59 条
  • [1] Aerobic TMAO respiration in Escherichia coli
    Ansaldi, Mireille
    Theraulaz, Laurence
    Baraquet, Claudine
    Panis, Gael
    Mejean, Vincent
    [J]. MOLECULAR MICROBIOLOGY, 2007, 66 (02) : 484 - 494
  • [2] THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY
    BAILEY, S
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 : 760 - 763
  • [3] The catalytic pathway of horseradish peroxidase at high resolution
    Berglund, GI
    Carlsson, GH
    Smith, AT
    Szöke, H
    Henriksen, A
    Hajdu, J
    [J]. NATURE, 2002, 417 (6887) : 463 - 468
  • [4] SEQUENCE-ANALYSIS OF SUBUNITS OF THE MEMBRANE-BOUND NITRATE REDUCTASE FROM A DENITRIFYING BACTERIUM - THE INTEGRAL MEMBRANE SUBUNIT PROVIDES A PROTOTYPE FOR THE DIHEME ELECTRON-CARRYING ARM OF A REDOX LOOP
    BERKS, BC
    PAGE, MD
    RICHARDSON, DJ
    REILLY, A
    CAVILL, A
    OUTEN, F
    FERGUSON, SJ
    [J]. MOLECULAR MICROBIOLOGY, 1995, 15 (02) : 319 - 331
  • [5] Insights into the respiratory electron transfer pathway from the structure of nitrate reductase A
    Bertero, MG
    Rothery, RA
    Palak, M
    Hou, C
    Lim, D
    Blasco, F
    Weiner, JH
    Strynadka, NCJ
    [J]. NATURE STRUCTURAL BIOLOGY, 2003, 10 (09) : 681 - 687
  • [6] Blochl E, 1997, EXTREMOPHILES, V1, P14
  • [7] H+/e(-) stoichiometry for NADH dehydrogenase I and dimethyl sulfoxide reductase in anaerobically grown Escherichia coli cells
    Bogachev, AV
    Murtazina, RA
    Skulachev, VP
    [J]. JOURNAL OF BACTERIOLOGY, 1996, 178 (21) : 6233 - 6237
  • [8] Brock T.D., 1978, THERMOPHILIC MICROOR, DOI DOI 10.1007/978-1-4612-6284-8_8
  • [9] Crystallography & NMR system:: A new software suite for macromolecular structure determination
    Brunger, AT
    Adams, PD
    Clore, GM
    DeLano, WL
    Gros, P
    Grosse-Kunstleve, RW
    Jiang, JS
    Kuszewski, J
    Nilges, M
    Pannu, NS
    Read, RJ
    Rice, LM
    Simonson, T
    Warren, GL
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 : 905 - 921
  • [10] Investigation of the environment surrounding iron-sulfur cluster 4 of Escherichia coli dimethylsulfoxide reductase
    Cheng, VWT
    Rothery, RA
    Bertero, MG
    Strynadka, NCJ
    Weiner, JH
    [J]. BIOCHEMISTRY, 2005, 44 (22) : 8068 - 8077