The 35S U5 snRNP Is Generated from the Activated Spliceosome during In vitro Splicing

被引:4
作者
Makarova, Olga V. [1 ,2 ]
Makarov, Evgeny M. [1 ,3 ]
机构
[1] Max Planck Inst Biophys Chem, Dept Cellular Biochem, D-37077 Gottingen, Germany
[2] Univ Leicester, Dept Biochem, Leicester LE1 7RH, Leics, England
[3] Brunel Univ London, Coll Hlth & Life Sci, Div Biosci, Uxbridge, Middx, England
关键词
CATALYTIC ACTIVATION; PROTEIN-COMPOSITION; TRI-SNRNP; COMPLEXES; DESIGN; CORE; STEP;
D O I
10.1371/journal.pone.0128430
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Primary gene transcripts of eukaryotes contain introns, which are removed during processing by splicing machinery. Biochemical studies In vitro have identified a specific pathway in which introns are recognised and spliced out. This occurs by progressive formation of spliceosomal complexes designated as E, A, B, and C. The composition and structure of these spliceosomal conformations have been characterised in many detail. In contrast, transitions between the complexes and the intermediates of these reactions are currently less clear. We have previously isolated a novel 35S U5 snRNP from HeLa nuclear extracts. The protein composition of this particle differed from the canonical 20S U5 snRNPs but was remarkably similar to the activated B* spliceosomes. Based on this observation we have proposed a hypothesis that 35S U5 snRNPs represent a dissociation product of the spliceosome after both transesterification reactions are completed. Here we provide experimental evidence that 35S U5 snRNPs are generated from the activated B* spliceosomes during In vitro splicing.
引用
收藏
页数:11
相关论文
共 16 条
[1]   Semiquantitative Proteomic Analysis of the Human Spliceosome via a Novel Two-Dimensional Gel Electrophoresis Method [J].
Agafonov, Dmitry E. ;
Deckert, Jochen ;
Wolf, Elmar ;
Odenwaelder, Peter ;
Bessonov, Sergey ;
Will, Cindy L. ;
Urlaub, Henning ;
Luehrmann, Reinhard .
MOLECULAR AND CELLULAR BIOLOGY, 2011, 31 (13) :2667-2682
[2]   IMMUNOAFFINITY PURIFICATION OF A [U4/U6-U5] TRI-SNRNP FROM HUMAN-CELLS [J].
BEHRENS, SE ;
LUHRMANN, R .
GENES & DEVELOPMENT, 1991, 5 (08) :1439-1452
[3]   Composition and three-dimensional EM structure of double affinity-purified, human prespliceosomal A complexes [J].
Behzadnia, Nastaran ;
Golas, Monika M. ;
Hartmuth, Klaus ;
Sander, Bjoern ;
Kastner, Berthold ;
Deckert, Jochen ;
Dube, Prakash ;
Will, Cindy L. ;
Urlaub, Henning ;
Stark, Holger ;
Luerhrmann, Reinhard .
EMBO JOURNAL, 2007, 26 (06) :1737-1748
[4]   Isolation of an active step I spliceosome and composition of its RNP core [J].
Bessonov, Sergey ;
Anokhina, Maria ;
Will, Cindy L. ;
Urlaub, Henning ;
Luehrmann, Reinhard .
NATURE, 2008, 452 (7189) :846-U3
[5]   Characterization of purified human B act spliceosomal complexes reveals compositional and morphological changes during spliceosome activation and first step catalysis [J].
Bessonov, Sergey ;
Anokhina, Maria ;
Krasauskas, Andrius ;
Golas, Monika M. ;
Sander, Bjoern ;
Will, Cindy L. ;
Urlaub, Henning ;
Stark, Holger ;
Luehrmann, Reinhard .
RNA, 2010, 16 (12) :2384-2403
[6]   Protein composition and electron microscopy structure of affinity-purified human spliceosomal B complexes isolated under physiological conditions [J].
Deckert, Jochen ;
Hartmuth, Maus ;
Boehringer, Daniel ;
Behzadnia, Nastaran ;
Will, Cindy L. ;
Kastner, Berthold ;
Stark, Holger ;
Urlaub, Henning ;
Luehrmann, Reinhard .
MOLECULAR AND CELLULAR BIOLOGY, 2006, 26 (14) :5528-5543
[7]   ACCURATE TRANSCRIPTION INITIATION BY RNA POLYMERASE-II IN A SOLUBLE EXTRACT FROM ISOLATED MAMMALIAN NUCLEI [J].
DIGNAM, JD ;
LEBOVITZ, RM ;
ROEDER, RG .
NUCLEIC ACIDS RESEARCH, 1983, 11 (05) :1475-1489
[8]   The Evolutionarily Conserved Core Design of the Catalytic Activation Step of the Yeast Spliceosome [J].
Fabrizio, Patrizia ;
Dannenberg, Julia ;
Dube, Prakash ;
Kastner, Berthold ;
Stark, Holger ;
Urlaub, Henning ;
Luehrmann, Reinhard .
MOLECULAR CELL, 2009, 36 (04) :593-608
[9]   Protein composition of human prespliceosomes isolated by a tobramycin affinity-selection method [J].
Hartmuth, K ;
Urlaub, H ;
Vornlocher, HP ;
Will, CL ;
Gentzel, M ;
Wilm, M ;
Lührmann, R .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (26) :16719-16724
[10]   Small nuclear ribonucleoprotein remodeling during catalytic activation of the spliceosome [J].
Makarov, EM ;
Makarova, OV ;
Urlaub, H ;
Gentzel, M ;
Will, CL ;
Wilm, M ;
Lührmann, R .
SCIENCE, 2002, 298 (5601) :2205-2208