Complete genome sequence of Leadbetterella byssophila type strain (4M15T)

被引：15

作者：

Abt, Birte ^{[2
]}

Teshima, Hazuki ^{[1
,3
]}

Lucas, Susan ^{[1
]}

Lapidus, Alla ^{[1
]}

Del Rio, Tijana Glavina ^{[1
]}

Nolan, Matt ^{[1
]}

Tice, Hope ^{[1
]}

Cheng, Jan-Fang ^{[1
]}

Pitluck, Sam ^{[1
]}

Liolios, Konstantinos ^{[1
]}

Pagani, Ioanna ^{[1
]}

Ivanova, Natalia ^{[1
]}

Mavromatis, Konstantinos ^{[1
]}

Pati, Amrita ^{[1
]}

Tapia, Roxane ^{[1
,3
]}

Han, Cliff ^{[1
,3
]}

Goodwin, Lynne ^{[1
,3
]}

Chen, Amy ^{[4
]}

Palaniappan, Krishna ^{[4
]}

Land, Miriam ^{[1
,5
]}

Hauser, Loren ^{[1
,5
]}

Chang, Yun-Juan ^{[1
,5
]}

Jeffries, Cynthia D. ^{[1
,5
]}

Rohde, Manfred ^{[6
]}

Goeker, Markus ^{[2
]}

Tindall, Brian J. ^{[2
]}

Detter, John C. ^{[1
,3
]}

Woyke, Tanja ^{[1
]}

Bristow, James ^{[1
]}

Eisen, Jonathan A. ^{[1
,7
]}

Markowitz, Victor ^{[4
]}

Hugenholtz, Philip ^{[1
,8
]}

Klenk, Hans-Peter ^{[2
]}

Kyrpides, Nikos C. ^{[1
]}

机构：

[1] US DOE, Joint Genome Inst, Walnut Creek, CA 94598 USA

[2] DSMZ German Collect Microorganisms & Cell Culture, Braunschweig, Germany

[3] Los Alamos Natl Lab, Biosci Div, Los Alamos, NM USA

[4] Univ Calif Berkeley, Lawrence Berkeley Lab, Biol Data Management & Technol Ctr, Berkeley, CA 94720 USA

[5] Lawrence Livermore Natl Lab, Livermore, CA USA

[6] HZI Helmholtz Ctr Infect Res, Braunschweig, Germany

[7] Univ Calif Davis, Genome Ctr, Davis, CA 95616 USA

[8] Univ Queensland, Sch Chem & Mol Biosci, Australian Ctr Ecogenom, Brisbane, Qld, Australia

来源：

STANDARDS IN GENOMIC SCIENCES | 2011年 / 4卷 / 01期

关键词：

non-motile; non-sporulating; aerobic; mesophile; Gram-negative; flexirubin; Cytophagaceae; GEBA; SP-NOV; GEN.-NOV; FAMILY FLEXIBACTERACEAE; PHYLOGENETIC ANALYSIS; BACTERIA; ARCHAEA; IDENTIFICATION; ALGORITHM; DATABASE; SYSTEM;

D O I：

10.4056/sigs.1413518

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Leadbetterella byssophila Weon et al. 2005 is the type species of the genus Leadbetterella of the family Cytophagaceae in the phylum Bacteroidetes. Members of the phylum Bacteroidetes are widely distributed in nature, especially in aquatic environments. They are of special interest for their ability to degrade complex biopolymers. L. byssophila occupies a rather isolated position in the tree of life and is characterized by its ability to hydrolyze starch and gelatine, but not agar, cellulose or chitin. Here we describe the features of this organism, together with the complete genome sequence, and annotation. L. byssophila is already the 16(th) member of the family Cytophagaceae whose genome has been sequenced. The 4,059,653 bp long single replicon genome with its 3,613 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

引用

页码：2 / 12

页数：11

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