GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease

被引:52
作者
Aouizerat, Bradley E. [2 ]
Vittinghoff, Eric [3 ]
Musone, Stacy L.
Pawlikowska, Ludmila [4 ]
Kwok, Pui-Yan [5 ]
Olgin, Jeffrey E. [1 ]
Tseng, Zian H. [1 ]
机构
[1] Univ Calif San Francisco, Dept Med, Div Cardiol, Sect Cardiac Electrophysiol,Inst Human Genet, San Francisco, CA 94143 USA
[2] Univ Calif San Francisco, Inst Human Genet, Dept Physiol Nursing, San Francisco, CA 94143 USA
[3] Univ Calif San Francisco, Dept Epidemiol & Biostat, San Francisco, CA 94143 USA
[4] Univ Calif San Francisco, Inst Human Genet, Dept Anesthesia & Perioperat Care, San Francisco, CA 94143 USA
[5] Univ Calif San Francisco, Cardiovasc Res Inst, Inst Human Genet, San Francisco, CA 94143 USA
基金
美国国家卫生研究院;
关键词
NOS1 REGULATOR NOS1AP; RISK-FACTOR; DEATH; POLYMORPHISMS; VARIANT; REPOLARIZATION; FAMILIES; PROTEIN; HEART;
D O I
10.1186/1471-2261-11-29
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Background: Epidemiologic evidence suggests a heritable component to risk for sudden cardiac arrest independent of risk for myocardial infarction. Recent candidate gene association studies for community sudden cardiac arrests have focused on a limited number of biological pathways and yielded conflicting results. We sought to identify novel gene associations for sudden cardiac arrest in patients with coronary artery disease by performing a genome-wide association study. Methods: Tagging SNPs (n = 338,328) spanning the genome were typed in a case-control study comparing 89 patients with coronary artery disease and sudden cardiac arrest due to ventricular tachycardia or ventricular fibrillation to 520 healthy controls. Results: Fourteen SNPs including 7 SNPs among 7 genes (ACYP2, AP1G2, ESR1, DGES2, GRIA1, KCTD1, ZNF385B) were associated with sudden cardiac arrest (all p < 1.30 x 10(-7)), following Bonferroni correction and adjustment for population substructure, age, and sex; genetic variation in ESR1 (p = 2.62 x 10(-8); Odds Ratio [OR] = 1.43, 95% confidence interval [CI]: 1.277, 1.596) has previously been established as a risk factor for cardiovascular disease. In tandem, the role of 9 genes for monogenic long QT syndrome (LQT1-9) was assessed, yielding evidence of association with CACNA1C (LQT8; p = 3.09 x 10(-4); OR = 1.18, 95% CI: 1.079, 1.290). We also assessed 4 recently published gene associations for sudden cardiac arrest, validating NOS1AP (p = 4.50 x 10(-2), OR = 1.15, 95% CI: 1.003, 1.326), CSMD2 (p = 6.6 x 10(-3), OR = 2.27, 95% CI: 1.681, 2.859), and AGTR1 (p = 3.00 x 10(-3), OR = 1.13, 95% CI: 1.042, 1.215). Conclusion: We demonstrate 11 gene associations for sudden cardiac arrest due to ventricular tachycardia/ventricular fibrillation in patients with coronary artery disease. Validation studies in independent cohorts and functional studies are required to confirm these associations.
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页数:10
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