FISH mapping in cattle (Bos taurus L.) is not yet out of fashion

被引：10

作者：

De Lorenzi, L. ^{[1
]}

Molteni, L. ^{[1
]}

Parma, P. ^{[1
]}

机构：

[1] Univ Milan, Dipartimento Sci Anim, I-20133 Milan, Italy

来源：

JOURNAL OF APPLIED GENETICS | 2010年 / 51卷 / 04期

关键词：

cattle; cytogenetic; fluorescence in situ hybridization; genome;

D O I：

10.1007/BF03208879

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

Physical mapping of genes by fluorescence in situ hybridization (FISH) seems to be out of fashion in species whose assembled genome sequences are available. However, in this work we evidence the existence of errors in gene location in the Btau_4.0 assembly. We show that DFNA5 and CHCHD6 genes are located on BTA4 and BTA22, respectively, instead of BTA10 and BTA3, as displayed by Btau_4.0. This report emphasizes the need to verify the data on physical localization of genes in the cattle genome (at least by taking into account comparative data reported in available papers) and the need to improve the cattle genome assembly. Our results indicate that FISH mapping in cattle is still useful.

引用

页码：497 / 499

页数：3

共 7 条

[1] A new case of rob(14;17) in cattle [J].

De Lorenzi, L. ;

Molteni, L. ;

De Giovanni, A. ;

Parma, P. .

CYTOGENETIC AND GENOME RESEARCH, 2008, 120 (1-2) :144-146

[2] The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution [J].

Elsik, Christine G. ;

Tellam, Ross L. ;

Worley, Kim C. ;

Gibbs, Richard A. ;

Abatepaulo, Antonio R. R. ;

Abbey, Colette A. ;

Adelson, David L. ;

Aerts, Jan ;

Ahola, Virpi ;

Alexander, Lee ;

Alioto, Tyler ;

Almeida, Iassudara G. ;

Amadio, Ariel F. ;

Anatriello, Elen ;

Antonarakis, Stylianos E. ;

Anzola, Juan M. ;

Astashyn, Alex ;

Bahadue, Suria M. ;

Baldwin, Cynthia L. ;

Barris, Wes ;

Baxter, Rebecca ;

Bell, Stephanie Nicole ;

Bennett, Anna K. ;

Bennett, Gary L. ;

Biase, Fernando H. ;

Boldt, Clayton R. ;

Bradley, Daniel G. ;

Brinkman, Fiona S. L. ;

Brinkmeyer-Langford, Candice L. ;

Brown, Wendy C. ;

Brownstein, Michael J. ;

Buhay, Christian ;

Caetano, Alexandre R. ;

Camara, Francisco ;

Carroll, Jeffrey A. ;

Carvalho, Wanessa A. ;

Casey, Theresa ;

Cervelatti, Elaine P. ;

Chack, Joseph ;

Chacko, Elsa ;

Chandrabose, Mimi M. ;

Chapin, Jennifer E. ;

Chapple, Charles E. ;

Chen, Hsiu-Chuan ;

Chen, Lin ;

Cheng, Ye ;

Cheng, Ze ;

Childers, Christopher P. ;

Chitko-McKown, Carol G. ;

Chiu, Readman .

SCIENCE, 2009, 324 (5926) :522-528

[3] A 1463 gene cattle-human comparative map with anchor points defined by human genome sequence coordinates [J].

Everts-van der Wind, A ;

Kata, SR ;

Band, MR ;

Rebeiz, M ;

Larkin, DM ;

Everts, RE ;

Green, CA ;

Liu, L ;

Natarajan, S ;

Goldammer, T ;

Lee, JH ;

McKay, S ;

Womack, JE ;

Lewin, HA .

GENOME RESEARCH, 2004, 14 (07) :1424-1437

[4]

Gautier M, 2001, GENET SEL EVOL, V33, P191, DOI 10.1051/gse:2001116

[5] Isolation, characterization and FISH assignments of horse BAC clones containing type I and II markers [J].

Mariat, D ;

Oustry-Vaiman, A ;

Cribiu, EP ;

Raudsepp, T ;

Chowdhary, BP ;

Guérin, G .

CYTOGENETICS AND CELL GENETICS, 2001, 92 (1-2) :144-148

[6] High-resolution comparative mapping among man, cattle and mouse suggests a role for repeat sequences in mammalian genome evolution [J].

Schibler, Laurent ;

Roig, Anne ;

Mahe, Marie-Francoise ;

Laurent, Pascal ;

Hayes, Helene ;

Rodolphe, Francois ;

Cribiu, Edmond P. .

BMC GENOMICS, 2006, 7 (1)

[7] A physical map of the bovine genome [J].

Snelling, Warren M. ;

Chiu, Readman ;

Schein, Jacqueline E. ;

Hobbs, Matthew ;

Abbey, Colette A. ;

Adelson, David L. ;

Aerts, Jan ;

Bennett, Gary L. ;

Bosdet, Ian E. ;

Boussaha, Mekki ;

Brauning, Rudiger ;

Caetano, Alexandre R. ;

Costa, Marcos M. ;

Crawford, Allan M. ;

Dalrymple, Brian P. ;

Eggen, Andre ;

Wind, Annelie Everts-van der ;

Floriot, Sandrine ;

Gautier, Mathieu ;

Gill, Clare A. ;

Green, Ronnie D. ;

Holt, Robert ;

Jann, Oliver ;

Jones, Steven J. M. ;

Kappes, Steven M. ;

Keele, John W. ;

de Jong, Pieter J. ;

Larkin, Denis M. ;

Lewin, Harris A. ;

McEwan, John C. ;

McKay, Stephanie ;

Marra, Marco A. ;

Mathewson, Carrie A. ;

Matukumalli, Lakshmi K. ;

Moore, Stephen S. ;

Murdoch, Brenda ;

Nicholas, Frank W. ;

Osoegawa, Kazutoyo ;

Roy, Alice ;

Salih, Hanni ;

Schibler, Laurent ;

Schnabel, Robert D. ;

Silveri, Licia ;

Skow, Loren C. ;

Smith, Timothy P. L. ;

Sonstegard, Tad S. ;

Taylor, Jeremy F. ;

Tellam, Ross ;

Van Tassell, Curtis P. ;

Williams, John L. .

GENOME BIOLOGY, 2007, 8 (08)

← 1 →