Expression, purification and preliminary X-ray crystallographic analysis of cyanobacterial biliverdin reductase

被引:2
作者
Watanabe, Aya [1 ]
Hirata, Kunio [2 ]
Hagiwara, Yoshinori [1 ]
Yutani, Yuko [1 ]
Sugishima, Masakazu [3 ]
Yamamoto, Masaki [2 ]
Fukuyama, Keiichi [1 ]
Wada, Kei [1 ]
机构
[1] Osaka Univ, Grad Sch Sci, Dept Sci Biol, Osaka 5600043, Japan
[2] RIKEN, SPring Ctr 8, Sayo, Hyogo 6795148, Japan
[3] Kurume Univ, Sch Med, Dept Med Biochem, Fukuoka 8300011, Japan
来源
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS | 2011年 / 67卷
关键词
bilirubin; biliverdin; microcrystals; microfocus beamline; SYNECHOCYSTIS SP PCC-6803; IX-ALPHA REDUCTASE; CRYSTAL-STRUCTURE; HEME; PROTEIN; COMPLEX; BIOSYNTHESIS; OXYGENASE-1; BILIRUBIN; ENZYME;
D O I
10.1107/S1744309110053431
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Biliverdin reductase (BVR) catalyzes the conversion of biliverdin IX alpha to bilirubin IX alpha with concomitant oxidation of an NADH or NADPH cofactor. This enzyme also binds DNA and enhances the transcription of specific genes. Recombinant cyanobacterial BVR was overexpressed in Escherichia coli, purified and crystallized. A native data set was collected to 2.34 A resolution on beamline BL38B1 at SPring-8. An SeMet data set was collected from a microcrystal (300 x 10 x 10 mu m) on the RIKEN targeted protein beamline BL32XU and diffraction spots were obtained to 3.0 A resolution. The native BVR crystal belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 58.8, b = 88.4, c = 132.6 A. Assuming that two molecules are present in the asymmetric unit, V (M) (the Matthews coefficient) was calculated to be 2.37 A3 Da-1 and the solvent content was estimated to be 48.1%. The structure of cyanobacterial BVR may provide insights into the mechanisms of its enzymatic and physiological functions.
引用
收藏
页码:313 / 317
页数:5
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