Structures and Agonist Binding Sites of Bitter Taste Receptor TAS2R5 Complexed with Gi Protein and Validated against Experiment

被引:13
作者
Yang, Moon Young [1 ]
Kim, Soo-Kyung [1 ]
Kim, Donghwa [2 ]
Liggett, Stephen B. [2 ,3 ,4 ,5 ]
Goddard, William A., III [1 ]
机构
[1] CALTECH, Mat & Proc Simulat Ctr, Pasadena, CA 91125 USA
[2] Univ S Florida, Dept Internal Med, Morsani Coll Med, Tampa, FL 33602 USA
[3] Univ S Florida, Dept Med, Morsani Coll Med, Tampa, FL 33602 USA
[4] Univ S Florida, Dept Mol Pharmacol, Morsani Coll Med, Tampa, FL 33602 USA
[5] Univ S Florida, Dept Physiol Med Engn & Internal Med, Morsani Coll Med, Tampa, FL 33602 USA
关键词
AIRWAY SMOOTH-MUSCLE; ACTIVATION; LIGAND; ASSOCIATION; ANTAGONIST; MECHANISM; ENSEMBLE;
D O I
10.1021/acs.jpclett.1c02162
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Bitter taste receptors (TAS2Rs) function in taste perception, but are also expressed in many extraoral tissues, presenting attractive therapeutic targets. TAS2R5s expressed on human airway smooth muscle cells can induce bronchodilation for treating asthma and other obstructive diseases. But TAS2R5s display low agonist affinity and the lack of a 3D structure has hindered efforts to design more active ligands. We report the structure of the activated TAS2R5 coupled to the Gi protein and bound to each of 19 agonists, using computational approaches. These agonists bind to two polar residues in TM3 that are unique for TAS2R5 among 25 TAS2R subtypes. Our predicted results correlate well with experimental results of agonist-receptor signaling coefficients, providing validation of the predicted structure. These results provide highly specific data on how agonists activate TAS2R5, how modifications of ligand structure alter receptor activation, and a guide to structure-based drug design.
引用
收藏
页码:9293 / 9300
页数:8
相关论文
共 42 条
[1]   Ligand- and mutation-induced conformational selection in the CCR5 chemokine G protein-coupled receptor [J].
Abrol, Ravinder ;
Trzaskowski, Bartosz ;
Goddard, William A., III ;
Nesterov, Alexandre ;
Olave, Ivan ;
Irons, Christopher .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (36) :13040-13045
[2]   Bihelix: Towards de novo structure prediction of an ensemble of G-protein coupled receptor conformations [J].
Abrol, Ravinder ;
Bray, Jenelle K. ;
Goddard, William A., III .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2012, 80 (02) :505-518
[3]   Computationally-predicted CB1 cannabinoid receptor mutants show distinct patterns of salt-bridges that correlate with their level of constitutive activity reflected in G protein coupling levels, thermal stability, and ligand binding [J].
Ahn, Kwang H. ;
Scott, Caitlin E. ;
Abrol, Ravinder ;
Goddard, William A., III ;
Kendall, Debra A. .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2013, 81 (08) :1304-1317
[4]   Taste and smell GPCRs in the lung: Evidence for a previously unrecognized widespread chemosensory system [J].
An, Steven S. ;
Liggett, Stephen B. .
CELLULAR SIGNALLING, 2017, 41 :82-88
[5]  
Ballesteros JA., 1995, METH NEUROSCI, V25, P366, DOI [DOI 10.1016/S1043-9471(05)80049-7, 10.1016/S1043-9471(05)80049-7]
[6]   Vertebrate Bitter Taste Receptors: Keys for Survival in Changing Environments [J].
Behrens, Maik ;
Meyerhof, Wolfgang .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2018, 66 (10) :2204-2213
[7]  
Belvisi MG, 2011, NAT MED, V17, P776, DOI [10.1038/nm0711-776a, 10.1038/nm0711-776b]
[8]   Use of G-Protein-Coupled and -Uncoupled CCR5 Receptors by CCR5 Inhibitor-Resistant and -Sensitive Human Immunodeficiency Virus Type 1 Variants [J].
Berro, Reem ;
Yasmeen, Anila ;
Abrol, Ravinder ;
Trzaskowski, Bartosz ;
Abi-Habib, Sarya ;
Grunbeck, Amy ;
Lascano, Danny ;
Goddard, William A., III ;
Klasse, Per Johan ;
Sakmar, Thomas P. ;
Moore, John P. .
JOURNAL OF VIROLOGY, 2013, 87 (12) :6569-6581
[9]   SuperBiHelix method for predicting the pleiotropic ensemble of G-protein-coupled receptor conformations [J].
Bray, Jenelle K. ;
Abrol, Ravinder ;
Goddard, William A., III ;
Trzaskowski, Bartosz ;
Scott, Caitlin E. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (01) :E72-E78
[10]   TAS2R bitter taste receptors regulate thyroid function [J].
Clark, Adam A. ;
Dotson, Cedrick D. ;
Elson, Amanda E. T. ;
Voigt, Anja ;
Boehm, Ulrich ;
Meyerhof, Wolfgang ;
Steinle, Nanette I. ;
Munger, Steven D. .
FASEB JOURNAL, 2015, 29 (01) :164-172