Genetic studies of seed longevity in hexaploid wheat using segregation and association mapping approaches

被引:71
作者
Arif, M. A. Rehman [1 ]
Nagel, M. [1 ]
Neumann, K. [1 ]
Kobiljski, B. [2 ]
Lohwasser, U. [1 ]
Boerner, A. [1 ]
机构
[1] Leibniz Inst Plant Genet & Crop Plant Res IPK, D-06466 Gatersleben, Germany
[2] Inst Field & Vegetable Crops, Novi Sad 21000, Serbia
关键词
Association genetics; Candidate genes; Genebanks; QTL mapping; Seed longevity; Triticum aestivum; QUANTITATIVE TRAIT LOCI; TRITICUM-AESTIVUM L; LINKAGE DISEQUILIBRIUM; PROTEIN-CONTENT; GRAIN-YIELD; RICE; STRESS; MAP; STORABILITY; GENOME;
D O I
10.1007/s10681-011-0471-5
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
Genebanks are entrusted with the storage, preservation and distribution of crop germplasm. Seed longevity is an important character in this context, but little is known regarding its genetic basis, largely because it is so strongly influenced by non-genetic factors. Here we present the outcome of a genetic dissection of seed longevity in bread wheat. We applied both a standard quantitative trait locus analysis based on segregation from a biparental cross, and an association analysis using a germplasm panel to detect marker trait associations. The latter revealed more loci than the former. Some of the genomic regions identified are known to contain genes determining spike architecture or aspects of biotic and abiotic stress responses. The results open perspectives for identification of favourable longevity alleles and the more accurate prediction of seed longevity in cereal germplasm collections.
引用
收藏
页码:1 / 13
页数:13
相关论文
共 60 条
[1]   Association mapping of yield and its components in rice cultivars [J].
Agrama, H. A. ;
Eizenga, G. C. ;
Yan, W. .
MOLECULAR BREEDING, 2007, 19 (04) :341-356
[2]  
[Anonymous], 2001, CROP DIVERSITY RISK
[3]  
[Anonymous], 2010, 2 REP STAT WORLD PLA
[4]   Seedling development and biomass as affected by seed size and morphology in durum wheat [J].
Aparicio, N ;
Villegas, D ;
Araus, JL ;
Blanco, R ;
Royo, C .
JOURNAL OF AGRICULTURAL SCIENCE, 2002, 139 :143-150
[5]   Genome-wide association mapping in Arabidopsis identifies previously known flowering time and pathogen resistance genes [J].
Aranzana, MJ ;
Kim, S ;
Zhao, KY ;
Bakker, E ;
Horton, M ;
Jakob, K ;
Lister, C ;
Molitor, J ;
Shindo, C ;
Tang, CL ;
Toomajian, C ;
Traw, B ;
Zheng, HG ;
Bergelson, J ;
Dean, C ;
Marjoram, P ;
Nordborg, M .
PLOS GENETICS, 2005, 1 (05) :531-539
[6]   Genetic analysis of seed-soluble oligosaccharides in relation to seed storability of Arabidopsis [J].
Bentsink, L ;
Alonso-Blanco, C ;
Vreugdenhil, D ;
Tesnier, K ;
Groot, SPC ;
Koornneef, M .
PLANT PHYSIOLOGY, 2000, 124 (04) :1595-1604
[7]   Mapping of quantitative trait loci determining agronomic important characters in hexaploid wheat (Triticum aestivum L.) [J].
Börner, A ;
Schumann, E ;
Fürste, A ;
Cöster, H ;
Leithold, B ;
Röder, MS ;
Weber, WE .
THEORETICAL AND APPLIED GENETICS, 2002, 105 (6-7) :921-936
[8]   Association mapping of kernel size and milling quality in wheat (Triticum aestivum L.) cultivars [J].
Breseghello, F ;
Sorrells, ME .
GENETICS, 2006, 172 (02) :1165-1177
[9]   Analysis of natural allelic variation of Arabidopsis seed germination and seed longevity traits between the accessions Landsberg erecta and Shakdara, using a new recombinant inbred line population [J].
Clerkx, EJM ;
El-Lithy, ME ;
Vierling, E ;
Ruys, GJ ;
Blankestijin-De Vries, H ;
Groot, SPC ;
Vreugdenhil, D ;
Koornneef, M .
PLANT PHYSIOLOGY, 2004, 135 (01) :432-443
[10]   Genetic differences in seed longevity of various Arabidopsis mutants [J].
Clerkx, EJM ;
Blankestijn-De Vries, H ;
Ruys, GJ ;
Groot, SPC ;
Koornneef, M .
PHYSIOLOGIA PLANTARUM, 2004, 121 (03) :448-461