Catalytic Sites of Medicinal Leech Enzyme Destabilase-Lysozyme (mlDL): Structure-Function Relationship

被引:3
作者
Zavalova, L. L.
Antipova, N. V.
Fadeeva, Yu. I. [1 ]
Pavlyukov, M. S.
Pletneva, N. V.
Pletnev, V. Z.
Baskova, I. P. [1 ]
机构
[1] Moscow MV Lomonosov State Univ, Fac Biol, Moscow 119991, Russia
基金
俄罗斯基础研究基金会;
关键词
bifunctional enzyme destabilase-lysozyme of medicinal leech; bifunctionality; three-dimensional model; site-directed mutagenesis; catalytic sites; endo-epsilon-(gamma-Glu)-Lys-isopeptidase; muramidase; glycosidase; CRYSTAL-STRUCTURE;
D O I
10.1134/S1068162012020148
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Based on the three-dimensional model of the bifunctional enzyme destabilase-lysozyme of the medicinal leech (mlDL) in complex with trimer of N-acetylglucosamine (NAG)(3) by site-directed mutagenesis method, the functional role of the group of amino acids (Glu14, Asp26, Ser29, Ser31, Lys38, His92) in manifestation of lysozyme (glycosidase, muramidase) and isopeptidase activities has been investigated by site-directed mutagenesis. The results obtained go well with hypothesis, that lysozyme active site of mlDL includes catalytic Glu14 and Asp26 residues, and isopeptidase site functions as Ser/Lys catalytic dyad presented by catalytic residues Ser29 and Lys38. Thus, among the invertebrate lysozymes, mlDL presents the first example of a bifunctional enzyme with identified position of the isopeptidase active site and localization of the corresponding catalytic residues.
引用
收藏
页码:198 / 202
页数:5
相关论文
共 15 条
  • [1] Antonov V.K, 1991, KHIMIYA PROTEOLIZA
  • [2] BASKOVA I P, 1985, Biokhimiya, V50, P424
  • [3] BASKOVA IP, 1994, BIOORG KHIM+, V20, P492
  • [4] Brunger A.T., 1999, X PLOR VERSION 3 1 M
  • [5] Unconventional serine proteases: Variations on the catalytic Ser/His/Asp triad configuration
    Ekici, Ozlem Dogan
    Paetzel, Mark
    Dalbey, Ross E.
    [J]. PROTEIN SCIENCE, 2008, 17 (12) : 2023 - 2037
  • [6] Coot:: model-building tools for molecular graphics
    Emsley, P
    Cowtan, K
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 : 2126 - 2132
  • [7] Crystal structure of tapes japonica lysozyme with substrate analogue - Structural basis of the catalytic mechanism and manifestation of its chitinase activity accompanied by quaternary structural change
    Goto, Takashi
    Abe, Yoshito
    Kakuta, Yoshimitsu
    Takeshita, Kohei
    Imoto, Taiji
    Ueda, Tadashi
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (37) : 27459 - 27467
  • [8] PROCHECK - A PROGRAM TO CHECK THE STEREOCHEMICAL QUALITY OF PROTEIN STRUCTURES
    LASKOWSKI, RA
    MACARTHUR, MW
    MOSS, DS
    THORNTON, JM
    [J]. JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1993, 26 : 283 - 291
  • [9] MacKerel A., 1998, ENCY COMPUTATIONAL C, V1, P271
  • [10] Mintz R.G., 1993, BIOPHARMACOLOGY, V6, P34