Structure of Human GIVD Cytosolic Phospholipase A2 Reveals Insights into Substrate Recognition

被引:9
|
作者
Wang, Hui [1 ]
Klein, Michael G. [1 ]
Snell, Gyorgy [1 ]
Lane, Weston [1 ]
Zou, Hua [1 ]
Levin, Irena [1 ]
Li, Ke [1 ]
Sang, Bi-Ching [1 ]
机构
[1] Takeda Calif, Dept Biol Struct, San Diego, CA 92121 USA
基金
美国国家卫生研究院;
关键词
cPLA(2); alpha/beta hydrolase; inhibitor; C2; domain; calcium binding; ARACHIDONIC-ACID; C2; DOMAIN; CRYSTAL-STRUCTURE; INHIBITORS; MEMBRANE; MECHANISM; TOPOLOGY; DISEASE; ENZYMES; SYSTEM;
D O I
10.1016/j.jmb.2016.05.012
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cytosolic phospholipases A(2) (cPLA(2)s) consist of a family of calcium-sensitive enzymes that function to generate lipid second messengers through hydrolysis of membrane-associated glycerophospholipids. The GIVD cPLA(2) (cPLA(2)delta) is a potential drug target for developing a selective therapeutic agent for the treatment of psoriasis. Here, we present two X-ray structures of human cPLA(2)delta, capturing an apo state, and in complex with a substrate-like inhibitor. Comparison of the apo and inhibitor-bound structures reveals conformational changes in a flexible cap that allows the substrate to access the relatively buried active site, providing new insight into the mechanism for substrate recognition. The cPLA(2)delta structure reveals an unexpected second C2 domain that was previously unrecognized from sequence alignments, placing cPLA(2)delta into the class of membrane-associated proteins that contain a tandem pair of C2 domains. Furthermore, our structures elucidate novel inter-domain interactions and define three potential calcium-binding sites that are likely important for regulation and activation of enzymatic activity. These findings provide novel insights into the molecular mechanisms governing cPLA(2)'s function in signal transduction. (C) 2016 Elsevier Ltd. All rights reserved.
引用
收藏
页码:2769 / 2779
页数:11
相关论文
共 50 条
  • [1] Structure and mechanism of human cytosolic phospholipase A2
    Dessen, A
    BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS, 2000, 1488 (1-2): : 40 - 47
  • [2] Crystal structure of human cytosolic phospholipase A2 reveals a novel topology and catalytic mechanism
    Dessen, A
    Tang, J
    Schmidt, H
    Stahl, M
    Clark, JD
    Seehra, J
    Somers, WS
    CELL, 1999, 97 (03) : 349 - 360
  • [3] Human cytosolic phospholipase A2 inhibitors
    Lloyd, AW
    DRUG DISCOVERY TODAY, 2000, 5 (07) : 301 - 302
  • [4] Pyrrolidine inhibitors of human cytosolic phospholipase A2
    Seno, K
    Okuno, T
    Nishi, K
    Murakami, Y
    Watanabe, F
    Matsuura, T
    Wada, M
    Fujii, Y
    Yamada, M
    Ogawa, T
    Okada, T
    Hashizume, H
    Kii, M
    Hara, S
    Hagishita, S
    Nakamoto, S
    Yamada, K
    Chikazawa, Y
    Ueno, M
    Teshirogi, I
    Ono, T
    Ohtani, M
    JOURNAL OF MEDICINAL CHEMISTRY, 2000, 43 (06) : 1041 - 1044
  • [5] Enzymatic properties of human cytosolic phospholipase A2γ
    Stewart, A
    Ghosh, M
    Spencer, DM
    Leslie, CC
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (33) : 29526 - 29536
  • [6] Structure-activity relationships of indole cytosolic phospholipase A2α inhibitors:: Substrate mimetics
    McKew, JC
    Lovering, F
    Clark, JD
    Bemis, J
    Xiang, YB
    Shen, M
    Zhang, W
    Alvarez, JC
    Joseph-McCarthy, D
    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2003, 13 (24) : 4501 - 4504
  • [7] Inhibition of human cytosolic phospholipase A2 by human annexin V
    Buckland, AG
    Wilton, DC
    BIOCHEMICAL JOURNAL, 1998, 329 : 369 - 372
  • [8] Inhibition of cytosolic phospholipase A2 in human neutrophils by oxatomide
    Triggiani, M
    Oriente, A
    Granata, F
    Calabrese, C
    Marone, G
    INTERNATIONAL ARCHIVES OF ALLERGY AND IMMUNOLOGY, 2001, 124 (1-3) : 367 - 370
  • [9] Involvement of cytosolic phospholipase A2 and secretory phospholipase A2 in arachidonic acid release from human neutrophils
    Marshall, J
    Krump, E
    Lindsay, T
    Downey, G
    Ford, DA
    Zhu, PH
    Walker, P
    Rubin, B
    JOURNAL OF IMMUNOLOGY, 2000, 164 (04): : 2084 - 2091
  • [10] Cardiolipin hydrolysis by human phospholipases A2 -: The multiple enzymatic activities of human cytosolic phospholipase A2
    Buckland, AG
    Kinkaid, AR
    Wilton, DC
    BIOCHIMICA ET BIOPHYSICA ACTA-LIPIDS AND LIPID METABOLISM, 1998, 1390 (01): : 65 - 72