Novel Pentameric Structure of the Diarrhea-Inducing Region of the Rotavirus Enterotoxigenic Protein NSP4

被引:19
作者
Chacko, Anita R. [2 ]
Arifullah, Mohammed [2 ]
Sastri, Narayan P. [1 ]
Jeyakanthan, Jeyaraman [3 ]
Ueno, Go [4 ]
Sekar, Kanagaraj [5 ]
Read, Randy J. [6 ]
Dodson, Eleanor J. [7 ]
Rao, Durga C. [1 ]
Suguna, Kaza [2 ]
机构
[1] Indian Inst Sci, Dept Microbiol & Cell Biol, Bangalore 560012, Karnataka, India
[2] Indian Inst Sci, Mol Biophys Unit, Bangalore 560012, Karnataka, India
[3] Alagappa Univ, Dept Bioinformat, Karaikkudi 630003, Tamil Nadu, India
[4] Riken SPring 8 Ctr, Div Synchrotron Radiat Instrumentat, Sayo, Hyogo 6785148, Japan
[5] Indian Inst Sci, Bioinformat Ctr, Bangalore 560012, Karnataka, India
[6] Univ Cambridge, Cambridge Inst Med Res, Dept Haematol, Wellcome Trust, Cambridge CB2 0XY, England
[7] Univ York, York Struct Biol Lab, Dept Chem, York YO10 5DD, N Yorkshire, England
关键词
NONSTRUCTURAL GLYCOPROTEIN NSP4; CRYSTAL-STRUCTURE; PLASMA-MEMBRANE; INTRACELLULAR CALCIUM; COILED-COIL; BINDING; SOFTWARE; SURFACES; DOMAIN;
D O I
10.1128/JVI.00349-11
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel pentameric structure which differs from the previously reported tetrameric form of the diarrhea-inducing region of the rotavirus enterotoxin NSP4 is reported here. A significant feature of this pentameric form is the absence of the calcium ion located in the core region of the tetrameric structures. The lysis of cells, the crystallization of the region spanning residues 95 to 146 of NSP4 (NSP4(95-146)) of strain ST3 (ST3: NSP4(95-146)) at acidic pH, and comparative studies of the recombinant purified peptide under different conditions by size-exclusion chromatography (SEC) and of the crystal structures suggested pH-, Ca2+-, and protein concentration-dependent oligomeric transitions in the peptide. Since the NSP4(95-146) mutant lacks the N-terminal amphipathic domain (AD) and most of the C-terminal flexible region (FR), to demonstrate that the pentameric transition is not a consequence of the lack of the N- and C-terminal regions, glutaraldehyde cross-linking of the Delta N72 and Delta N94 mutant proteins, which contain or lack the AD, respectively, but possess the complete C-terminal FR, was carried out. The results indicate the presence of pentamers in preparations of these longer mutants. Detailed SEC analyses of Delta N94 prepared under different conditions, however, revealed protein concentration-dependent but metal ion-and pH-independent pentamer accumulation at high concentrations which dissociated into tetramers and lower oligomers at low protein concentrations. While calcium appeared to stabilize the tetramer, magnesium in particular stabilized the dimer. Delta N72 existed primarily in the multimeric form under all conditions. These findings of a calcium-free NSP4 pentamer and its concentration-dependent and largely calcium-independent oligomeric transitions open up a new dimension in an understanding of the structural basis of its multitude of functions.
引用
收藏
页码:12721 / 12732
页数:12
相关论文
共 51 条
[1]   PHENIX:: building new software for automated crystallographic structure determination [J].
Adams, PD ;
Grosse-Kunstleve, RW ;
Hung, LW ;
Ioerger, TR ;
McCoy, AJ ;
Moriarty, NW ;
Read, RJ ;
Sacchettini, JC ;
Sauter, NK ;
Terwilliger, TC .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2002, 58 :1948-1954
[2]   RECEPTOR ACTIVITY OF ROTAVIRUS NONSTRUCTURAL GLYCOPROTEIN-NS28 [J].
AU, KS ;
CHAN, WK ;
BURNS, JW ;
ESTES, MK .
JOURNAL OF VIROLOGY, 1989, 63 (11) :4553-4562
[3]   Age-dependent diarrhea induced by a rotaviral nonstructural glycoprotein [J].
Ball, JM ;
Tian, P ;
Zeng, CQY ;
Morris, AP ;
Estes, MK .
SCIENCE, 1996, 272 (5258) :101-104
[4]   Very fast prediction and rationalization of pKa values for protein-ligand complexes [J].
Bas, Delphine C. ;
Rogers, David M. ;
Jensen, Jan H. .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2008, 73 (03) :765-783
[5]   TOPOLOGY OF THE NON-STRUCTURAL ROTAVIRUS RECEPTOR GLYCOPROTEIN-NS28 IN THE ROUGH ENDOPLASMIC-RETICULUM [J].
BERGMANN, CC ;
MAASS, D ;
PORUCHYNSKY, MS ;
ATKINSON, PH ;
BELLAMY, AR .
EMBO JOURNAL, 1989, 8 (06) :1695-1703
[6]   Rotavirus NSP4 induces a novel vesicular compartment regulated by calcium and associated with viroplasms [J].
Berkova, Z. ;
Crawford, S. E. ;
Trugnan, G. ;
Yoshimori, T. ;
Morris, A. P. ;
Estes, M. K. .
JOURNAL OF VIROLOGY, 2006, 80 (12) :6061-6071
[7]   Rotavirus enterotoxin NSP4 binds to the extracellular matrix proteins laminin-β3 and fibronectin [J].
Boshuizen, JA ;
Rossen, JWA ;
Sitaram, CK ;
Kimenai, FFP ;
Simons-Oosterhuis, Y ;
Laffeber, C ;
Büller, HA ;
Einerhand, AWC .
JOURNAL OF VIROLOGY, 2004, 78 (18) :10045-10053
[8]   Crystal structure of the oligomerization domain of NSP4 from rotavirus reveals a core metal-binding site [J].
Bowman, GD ;
Nodelman, IM ;
Levy, O ;
Lin, SL ;
Tian, P ;
Zamb, TJ ;
Udem, SA ;
Venkataraghavan, B ;
Schutt, CE .
JOURNAL OF MOLECULAR BIOLOGY, 2000, 304 (05) :861-871
[9]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[10]   Rotavirus nonstructural glycoprotein NSP4 is secreted from the apical surfaces of polarized epithelial cells [J].
Bugarcic, Andrea ;
Taylor, John A. .
JOURNAL OF VIROLOGY, 2006, 80 (24) :12343-12349