Quantum-chemical investigation of nitrosonium complexes of complementary pair 1-methylcytosine-9-methylguanine

被引:2
作者
Andreev, R. V. [1 ]
Borodkin, G. I. [1 ,2 ]
Shubin, V. G. [1 ]
机构
[1] Russian Acad Sci, Vorozhtsov Novosibirsk Inst Organ Chem, Siberian Branch, Novosibirsk 630090, Russia
[2] Novosibirsk State Univ, Novosibirsk 630090, Russia
基金
俄罗斯基础研究基金会;
关键词
NITRIC-OXIDE; AROMATIC-COMPOUNDS; CROSS-LINKING; NITROUS-ACID; CYTOSINE; DNA; MECHANISM; GUANINE;
D O I
10.1134/S1070428015050140
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
By the method RI-MP2/L1 nitrosonium complexes were explored of 1-methylcytosine and 9-methylguanine, structural analogs of nucleotide bases cytosine and guanine, as well as of their complementary pair. The addition of a nitrosonium cation to the molecules of these compounds and to their pair leads to the formation of various types of nitrosonium complexes (1 eta-3 eta). n-Complexes with the coordination of NO+ cation to nitrogen and oxygen atoms are commonly more feasible in energy as compared with pi-complexes. The complex with cation NO+ coordinated at the oxygen atom of the carbonyl group and N-7 atom of the guanine fragment of the pair corresponds to the global minimum on the potential energy surface. The energy gain at the interaction of nitrosonium complexes of 1-methylcytosine and 9-methylguanine with 9-methylguanine and 1-methylcytosine respectively is usually larger than at the formation of a neutral pair 1-methylcytosine-9-methylguanine.
引用
收藏
页码:664 / 669
页数:6
相关论文
共 27 条
[1]   TABLES OF BOND LENGTHS DETERMINED BY X-RAY AND NEUTRON-DIFFRACTION .1. BOND LENGTHS IN ORGANIC-COMPOUNDS [J].
ALLEN, FH ;
KENNARD, O ;
WATSON, DG ;
BRAMMER, L ;
ORPEN, AG ;
TAYLOR, R .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1987, (12) :S1-S19
[2]   Quantum-chemical study on cytosine nitrosonium complexes [J].
Andreev, R. V. ;
Borodkin, G. I. ;
Shubin, V. G. .
RUSSIAN JOURNAL OF ORGANIC CHEMISTRY, 2013, 49 (03) :432-438
[3]   Quantum-chemical study on adenine nitrosonium complexes [J].
Andreev, R. V. ;
Borodkin, G. I. ;
Shubin, V. G. .
RUSSIAN JOURNAL OF ORGANIC CHEMISTRY, 2012, 48 (10) :1337-1344
[4]   Quantum-chemical study on uracil and thymine nitrosonium complexes [J].
Andreev, R. V. ;
Borodkin, G. I. ;
Shubin, V. G. .
RUSSIAN JOURNAL OF ORGANIC CHEMISTRY, 2012, 48 (09) :1216-1221
[5]   Quantum-Chemical Study on Nitrosonium Complexes of Bi- and Polycyclic Aromatic Compounds [J].
Andreev, R. V. ;
Borodkin, G. I. ;
Shubin, V. G. .
RUSSIAN JOURNAL OF ORGANIC CHEMISTRY, 2012, 48 (01) :52-58
[6]   Quantum-chemical study of nitrosonium complexes of monocyclic aromatic compounds [J].
Andreev, R. V. ;
Borodkin, G. I. ;
Shubin, V. G. .
RUSSIAN JOURNAL OF ORGANIC CHEMISTRY, 2011, 47 (11) :1703-1709
[7]  
Borodkin G.I., 2001, RUSS CHEM REV+, V70, P211, DOI [10.1070/RC2001v070n03ABEH000634, DOI 10.1070/RC2001V070N03ABEH000634]
[8]   Nitric oxide-induced deamination of cytosine and guanine in deoxynucleosides and oligonucleotides [J].
Caulfield, JL ;
Wishnok, JS ;
Tannenbaum, SR .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (21) :12689-12695
[9]   Gas phase rotamers of the nucleobase 9-methylguanine enol and its monohydrate: Optical spectroscopy and quantum mechanical calculations [J].
Chin, W ;
Mons, M ;
Piuzzi, F ;
Tardivel, B ;
Dimicoli, I ;
Gorb, L ;
Leszczynski, J .
JOURNAL OF PHYSICAL CHEMISTRY A, 2004, 108 (40) :8237-8243
[10]   COMBINED QUANTUM AND MOLECULAR MECHANICAL STUDY OF DNA CROSS-LINKING BY NITROUS-ACID [J].
ELCOCK, AH ;
LYNE, PD ;
MULHOLLAND, AJ ;
NANDRA, A ;
RICHARDS, WG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (16) :4706-4707