Mitochondrial GWA Analysis of Lipid Profile Identifies Genetic Variants to Be Associated with HDL Cholesterol and Triglyceride Levels

被引:15
|
作者
Flaquer, Antonia [1 ,2 ]
Rospleszcz, Susanne [1 ,2 ]
Reischl, Eva [3 ,5 ]
Zeilinger, Sonja [3 ,5 ]
Prokisch, Holger [4 ]
Meitinger, Thomas [4 ]
Meisinger, Christa [5 ]
Peters, Annette [5 ]
Waldenberger, Melanie [3 ,5 ]
Grallert, Harald [3 ,5 ]
Strauch, Konstantin [1 ,2 ]
机构
[1] Univ Munich, Chair Genet Epidemiol, Inst Med Informat Biometry & Epidemiol, Munich, Germany
[2] Helmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Genet Epidemiol, Neuherberg, Germany
[3] Helmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Res Unit Mol Epidemiol, Neuherberg, Germany
[4] Helmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Human Genet, Neuherberg, Germany
[5] Helmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Epidemiol 2, Neuherberg, Germany
来源
PLOS ONE | 2015年 / 10卷 / 05期
关键词
DENSITY-LIPOPROTEIN CHOLESTEROL; GENOME-WIDE ASSOCIATION; CORONARY-ARTERY-DISEASE; OXIDATIVE STRESS; GENDER-DIFFERENCES; ENDOTHELIAL-CELLS; DYSFUNCTION; LOCI; ACCUMULATION; MUTATIONS;
D O I
10.1371/journal.pone.0126294
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
It has been suggested that mitochondrial dysfunction has an influence on lipid metabolism. The fact that mitochondrial defects can be accumulated over time as a normal part of aging may explain why cholesterol levels often are altered with age. To test the hypothesis whether mitochondrial variants are associated with lipid profile (total cholesterol, LDL, HDL, and triglycerides) we analyzed a total number of 978 mitochondrial single nucleotide polymorphisms (mtSNPs) in a sample of 2,815 individuals participating in the population-based KORA F4 study. To assess mtSNP association while taking the presence of heteroplasmy into account we used the raw signal intensity values measured on the microarray and applied linear regression. Ten mtSNPs (mt3285, mt3336, mt5285, mt6591, mt6671, mt9163, mt13855, mt13958, mt14000, and mt14580) were significantly associated with HDL cholesterol and one mtSNP (mt15074) with triglycerides levels. These results highlight the importance of the mitochondrial genome among the factors that contribute to the regulation of lipid levels. Focusing on mitochondrial variants may lead to further insights regarding the underlying physiological mechanisms, or even to the development of innovative treatments. Since this is the first mitochondrial genome-wide association analysis (mtGWAS) for lipid profile, further analyses are needed to follow up on the present findings.
引用
收藏
页数:13
相关论文
共 28 条
  • [21] Sugar-Sweetened Beverage Consumption May Modify Associations Between Genetic Variants in the CHREBP (Carbohydrate Responsive Element Binding Protein) Locus and HDL-C (High-Density Lipoprotein Cholesterol) and Triglyceride Concentrations
    Haslam, Danielle E.
    Peloso, Gina M.
    Guirette, Melanie
    Imamura, Fumiaki
    Bartz, Traci M.
    Pitsillides, Achilleas N.
    Wang, Carol A.
    Li-Gao, Ruifang
    Westra, Jason M.
    Pitkanen, Niina
    Young, Kristin L.
    Graff, Mariaelisa
    Wood, Alexis C.
    Braun, Kim V. E.
    Luan, Jian'an
    Kahonen, Mika
    Kiefte-de Jong, Jessica C.
    Ghanbari, Mohsen
    Tintle, Nathan
    Lemaitre, Rozenn N.
    Mook-Kanamori, Dennis O.
    North, Kari
    Helminen, Mika
    Mossavar-Rahmani, Yasmin
    Snetselaar, Linda
    Martin, Lisa W.
    Viikari, Jorma S.
    Oddy, Wendy H.
    Pennell, Craig E.
    Rosendall, Frits R.
    Ikram, M. Arfan
    Uitterlinden, Andre G.
    Psaty, Bruce M.
    Mozaffarian, Dariush
    Rotter, Jerome, I
    Taylor, Kent D.
    Lehtimaki, Terho
    Raitakari, Olli T.
    Livingston, Kara A.
    Voortman, Trudy
    Forouhi, Nita G.
    Wareham, Nick J.
    de Mutsert, Renee
    Rich, Steven S.
    Manson, JoAnn E.
    Mora, Samia
    Ridker, Paul M.
    Merino, Jordi
    Meigs, James B.
    Dashti, Hassan S.
    CIRCULATION-GENOMIC AND PRECISION MEDICINE, 2021, 14 (04): : 506 - 516
  • [22] Exome chip meta-analysis identifies novel loci and East Asian-specific coding variants that contribute to lipid levels and coronary artery disease
    Lu, Xiangfeng
    Peloso, Gina M.
    Liu, Dajiang J.
    Wu, Ying
    Zhang, He
    Zhou, Wei
    Li, Jun
    Tang, Clara Sze-man
    Dorajoo, Rajkumar
    Li, Huaixing
    Long, Jirong
    Guo, Xiuqing
    Xu, Ming
    Spracklen, Cassandra N.
    Chen, Yang
    Liu, Xuezhen
    Zhang, Yan
    Khor, Chiea Chuen
    Liu, Jianjun
    Sun, Liang
    Wang, Laiyuan
    Gao, Yu-Tang
    Hu, Yao
    Yu, Kuai
    Wang, Yiqin
    Cheung, Chloe Yu Yan
    Wang, Feijie
    Huang, Jianfeng
    Fan, Qiao
    Cai, Qiuyin
    Chen, Shufeng
    Shi, Jinxiu
    Yang, Xueli
    Zhao, Wanting
    Sheu, Wayne H-H
    Cherny, Stacey Shawn
    He, Meian
    Feranil, Alan B.
    Adair, Linda S.
    Gordon-Larsen, Penny
    Du, Shufa
    Varma, Rohit
    Chen, Yii-Der Ida
    Shu, Xiao-Ou
    Lam, Karen Siu Ling
    Wong, Tien Yin
    Ganesh, Santhi K.
    Mo, Zengnan
    Hveem, Kristian
    Fritsche, Lars G.
    NATURE GENETICS, 2017, 49 (12) : 1722 - +
  • [23] HDL-cholesterol concentration in pregnant Chinese Han women of late second trimester associated with genetic variants in CETP, ABCA1, APOC3, and GALNT2
    Cui, Mingxuan
    Li, Wei
    Ma, Liangkun
    Ping, Fan
    Liu, Juntao
    Wu, Xueyan
    Mao, Jiangfeng
    Wang, Xi
    Nie, Min
    ONCOTARGET, 2017, 8 (34) : 56737 - 56746
  • [24] Genome-Wide Association Study Identifies a Functional SIDT2 Variant Associated With HDL-C (High-Density Lipoprotein Cholesterol) Levels and Premature Coronary Artery Disease
    Leon-Mimila, Paola
    Villamil-Ramirez, Hugo
    Macias-Kauffer, Luis R.
    Jacobo-Albavera, Leonor
    Lopez-Contreras, Blanca E.
    Posadas-Sanchez, Rosalinda
    Posadas-Romero, Carlos
    Romero-Hidalgo, Sandra
    Moran-Ramos, Sofia
    Dominguez-Perez, Mayra
    Olivares-Arevalo, Marisol
    Lopez-Montoya, Priscilla
    Nieto-Guerra, Roberto
    Acuna-Alonzo, Victor
    Macin-Perez, Gaston
    Barquera-Lozano, Rodrigo
    Del-Rio-Navarro, Blanca E.
    Gonzalez-Gonzalez, Israel
    Campos-Perez, Francisco
    Gomez-Perez, Francisco
    Valdes, Victor J.
    Sampieri, Alicia
    Reyes-Garcia, Juan G.
    Carrasco-Portugal, Miriam Del C.
    Flores-Murrieta, Francisco J.
    Aguilar-Salinas, Carlos A.
    Vargas-Alarcon, Gilberto
    Shih, Diana
    Meikle, Peter J.
    Calkin, Anna C.
    Drew, Brian G.
    Vaca, Luis
    Lusis, Aldons J.
    Huertas-Vazquez, Adriana
    Villarreal-Molina, Teresa
    Canizales-Quinteros, Samuel
    ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY, 2021, 41 (09) : 2494 - 2508
  • [25] Meta-analysis of GWAS on two Chinese populations followed by replication identifies novel genetic variants on the X chromosome associated with systemic lupus erythematosus
    Zhang, Yan
    Zhang, Jing
    Yang, Jing
    Wang, Yongfei
    Zhang, Lu
    Zuo, Xianbo
    Sun, Liangdan
    Pan, Hai-Feng
    Hirankarn, Nattiya
    Wang, Tingyou
    Chen, Ruoyan
    Ying, Dingge
    Zeng, Shuai
    Shen, Jiangshan Jane
    Lee, Tsz Leung
    Lau, Chak Sing
    Chan, Tak Mao
    Leung, Alexander Moon Ho
    Mok, Chi Chiu
    Wong, Sik Nin
    Lee, Ka Wing
    Ho, Marco Hok Kung
    Lee, Pamela Pui Wah
    Chung, Brian Hon-Yin
    Chong, Chun Yin
    Wong, Raymond Woon Sing
    Mok, Mo Yin
    Wong, Wilfred Hing Sang
    Tong, Kwok Lung
    Tse, Niko Kei Chiu
    Li, Xiang-Pei
    Avihingsanon, Yingyos
    Rianthavorn, Pornpimol
    Deekajorndej, Thavatchai
    Suphapeetiporn, Kanya
    Shotelersuk, Vorasuk
    Ying, Shirley King Yee
    Fung, Samuel Ka Shun
    Lai, Wai Ming
    Wong, Chun-Ming
    Ng, Irene Oi Lin
    Garcia-Barcelo, Maria-Merce
    Cherny, Stacey S.
    Tam, Paul Kwong-Hang
    Sham, Pak Chung
    Yang, Sen
    Ye, Dong Qing
    Cui, Yong
    Zhang, Xue-Jun
    Lau, Yu Lung
    HUMAN MOLECULAR GENETICS, 2015, 24 (01) : 274 - 284
  • [26] Trans-Ethnic Meta-Analysis Identifies Common and Rare Variants Associated with Hepatocyte Growth Factor Levels in the Multi-Ethnic Study of Atherosclerosis (MESA)
    Larson, Nicholas B.
    Berardi, Cecilia
    Decker, Paul A.
    Wassel, Christina L.
    Kirsch, Phillip S.
    Pankow, James S.
    Sale, Michele M.
    de Andrade, Mariza
    Sicotte, Hugues
    Tang, Weihong
    Hanson, Naomi Q.
    Tsai, Michael Y.
    Taylor, Kent D.
    Bielinski, Suzette J.
    ANNALS OF HUMAN GENETICS, 2015, 79 (04) : 264 - 274
  • [27] Analysis of Genetic Variants Associated with Levels of Immune Modulating Proteins for Impact on Alzheimer's Disease Risk Reveal a Potential Role for SIGLEC14
    Shaw, Benjamin C.
    Katsumata, Yuriko
    Simpson, James F.
    Fardo, David W.
    Estus, Steven
    GENES, 2021, 12 (07)
  • [28] The rs508487, rs236911, and rs236918 Genetic Variants of the Proprotein Convertase Subtilisin-Kexin Type 7 (PCSK7) Gene Are Associated with Acute Coronary Syndrome and with Plasma Concentrations of HDL-Cholesterol and Triglycerides
    Vargas-Alarcon, Gilberto
    Perez-Mendez, Oscar
    Gonzalez-Pacheco, Hector
    Ramirez-Bello, Julian
    Posadas-Sanchez, Rosalinda
    Escobedo, Galileo
    Fragoso, Jose Manuel
    CELLS, 2021, 10 (06)