Genome-wide identification and analysis of the growth-regulating factor family in tobacco (Nicotiana tabacum)

被引:34
|
作者
Zhang, Jianfeng [1 ]
Li, Zefeng [1 ]
Jin, Jingjing [1 ]
Xie, Xiaodong [1 ]
Zhang, Hui [1 ]
Chen, Qiansi [1 ]
Luo, Zhaopeng [1 ]
Yang, Jun [1 ]
机构
[1] Zhengzhou Tobacco Res Inst CNTC, China Tobacco Gene Res Ctr, Zhengzhou 450001, Henan, Peoples R China
关键词
GRF; Tobacco; Gene structure; Phylogenetic; Gene duplication; Hormone response; GRF TRANSCRIPTION FACTORS; ARABIDOPSIS-THALIANA; CELL-PROLIFERATION; GENE FAMILY; LEAF SIZE; COACTIVATOR; REPRESSOR; COTYLEDON; MIR396; YIELD;
D O I
10.1016/j.gene.2017.09.070
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Growth-regulating factors (GRFs) are plant-specific transcription factors that have important functions in regulating plant growth and development. GRF gene families have been described in several plant species, but a comprehensive analysis of the GRF gene family in tobacco has not yet been reported. In this study, we identified 25 NtabGRF genes in N. tabacum. The gene structures, motifs, and cis-acting regulatory elements of the NtabGRF genes were analyzed. Phylogenetic analysis divided the genes into six clusters. Additionally, highly conserved regions of microsynteny were identified in all of the sequenced tobacco species. Expression analysis showed that NtabGRF genes were highly expressed in actively growing tissues and responded to various hormone treatments. Our results provide foundational information about the GRF gene family in tobacco species, and open the door for future research on the functions of these genes.
引用
收藏
页码:117 / 127
页数:11
相关论文
共 50 条
  • [11] Genome-wide characterization and expression analysis of the growth-regulating factor family in Saccharum
    Zilin Wu
    Xinglong Chen
    Danwen Fu
    Qiaoying Zeng
    Xiaoning Gao
    Nannan Zhang
    Jiayun Wu
    BMC Plant Biology, 22
  • [12] Genome-wide characterization and expression analysis of the growth-regulating factor family in Saccharum
    Wu, Zilin
    Chen, Xinglong
    Fu, Danwen
    Zeng, Qiaoying
    Gao, Xiaoning
    Zhang, Nannan
    Wu, Jiayun
    BMC PLANT BIOLOGY, 2022, 22 (01)
  • [13] Genome-Wide Identification and Expression Profile of the SNAT Gene Family in Tobacco (Nicotiana tabacum)
    Zhang, Jiemei
    Yao, Zhengping
    Zhang, Renjun
    Mou, Zongmin
    Yin, Honghui
    Xu, Tianyang
    Zhao, Dake
    Chen, Suiyun
    FRONTIERS IN GENETICS, 2020, 11
  • [14] Genome-Wide Identification and Expression Analysis of the Phytocyanin Gene Family in Nicotiana tabacum
    Wang, Peiling
    Xu, Xiaohong
    Li, Yong
    Zhang, Hecui
    Zhang, Xuejie
    Zhou, Siru
    Liu, Yimei
    Feng, Yunyan
    Zuo, Tonghong
    Zhu, Liquan
    PHYTON-INTERNATIONAL JOURNAL OF EXPERIMENTAL BOTANY, 2023, 92 (05) : 1469 - 1492
  • [15] Genome-Wide Identification and Expression Analysis of Growth-Regulating Factor Family in Sweet Potato and Its Two Relatives
    Huang, Wenhui
    Lin, Xiongjian
    Li, Zhenqin
    Mai, Jinglin
    Hu, Mengqin
    Zhu, Hongbo
    GENES, 2024, 15 (08)
  • [16] Genome-wide identification of growth-regulating factor transcription factor family related to leaf and stem development in alfalfa
    Sun, Yue
    Li, He
    Wu, Jiajing
    Zhang, Kangning
    Tang, Wei
    Cong, Lili
    Xie, Hongli
    Wang, Zeng-Yu
    Chai, Maofeng
    FRONTIERS IN PLANT SCIENCE, 2022, 13
  • [17] Genome-Wide Analysis of the Growth-Regulating Factor Family in Peanut (Arachis hypogaea L.)
    Zhao, Kunkun
    Li, Ke
    Ning, Longlong
    He, Jialin
    Ma, Xingli
    Li, Zhongfeng
    Zhang, Xingguo
    Yin, Dongmei
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 20 (17)
  • [18] Genome-Wide Identification and Characterization of GASA Gene Family in Nicotiana tabacum
    Li, Zhaowu
    Gao, Junping
    Wang, Genhong
    Wang, Shuaibin
    Chen, Kai
    Pu, Wenxuan
    Wang, Yaofu
    Xia, Qingyou
    Fan, Xiaorong
    FRONTIERS IN GENETICS, 2022, 12
  • [19] Genome-wide identification and analysis of GRF (growth-regulating factor) gene family in Camila sativa through in silico approaches
    Zafar, Imran
    Rubab, Alia
    Aslam, Maryam
    Ahmad, Syed Umair
    Liyaqat, Iqra
    Malik, Abdul
    Alam, Mahboob
    Wani, Tanveer A.
    Khan, Azmat Ali
    JOURNAL OF KING SAUD UNIVERSITY SCIENCE, 2022, 34 (04)
  • [20] Genome-wide identification and expression analysis of NF-Y gene family in tobacco (Nicotiana tabacum L.)
    Tian, Yue
    Song, Kangkang
    Li, Bin
    Song, Yanru
    Zhang, Xiaohua
    Li, Haozhen
    Yang, Long
    SCIENTIFIC REPORTS, 2024, 14 (01)