Molecular phylogenetic analysis reveals seven new Diaporthe species from Italy

被引:47
作者
Dissanayake, A. J. [1 ,2 ]
Camporesi, E. [3 ]
Hyde, K. D. [2 ]
Wei, Zhang [1 ]
Yan, J. Y. [1 ]
Li, X. H. [1 ]
机构
[1] Beijing Acad Agr & Forestry Sci, Beijing Key Lab Environm Friendly Management Frui, Inst Plant & Environm Protect, Beijing 100097, Peoples R China
[2] Mae Fah Luang Univ, Sch Sci, Ctr Excellence Fungal Res, Chiang Rai 57100, Thailand
[3] AMB Grp Micol Forlivese Antonio Cicognani, Via Roma 18, Forli, Italy
关键词
Diaporthales; Hosts; Morphology; Sordariomycetes; Taxonomy; 1ST REPORT; SHOOT BLIGHT; SOUTH-AFRICA; PRIMER SETS; PHOMOPSIS; DIEBACK; COMPLEX; ROT; PATHOGENICITY; REASSESSMENT;
D O I
10.5943/mycosphere/8/5/4
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Seven new species of Diaporthe, D. acericola on Acer negundo, D. cichorii on Cichorium intybus, D. dorycnii on Dorycnium hirsutum, D. lonicerae on Lonicera sp., Laurus nobilis and Torilis arvensis, D. pseudotsugae on Pseudotsuga menziesii, D. schoeni on Schoenus nigricans, Carduus sp. and Plantago sp. and D. torilicola on Torilis arvensis from Italy are described and illustrated based on morphological characteristics and molecular analyses. In addition to the new species, eight known species of Diaporthe, D. eres, D. foeniculina, D. gulyae, D. novem, D. ravennica, D. rhusicola, D. rudis and D. sterilis were identified. Phylogenetic relationships of the new species with other Diaporthe species were revealed by DNA sequence analyses based on the internal transcribed spacer (ITS) region, translation elongation factor 1-alpha (TEF), partial regions of the beta-tubulin (BT) and calmodulin (CAL). Among 44 isolates, D. eres was the dominant species, accounting for 27% of the frequency of occurrence. Our study revealed a high diversity of undescribed Diaporthe species from various hosts in Italy.
引用
收藏
页码:853 / 877
页数:25
相关论文
共 57 条
  • [31] Families of Sordariomycetes
    Maharachchikumbura, Sajeewa S. N.
    Hyde, Kevin D.
    Jones, E. B. Gareth
    McKenzie, E. H. C.
    Bhat, Jayarama D.
    Dayarathne, Monika C.
    Huang, Shi-Ke
    Norphanphoun, Chada
    Senanayake, Indunil C.
    Perera, Rekhani H.
    Shang, Qiu-Ju
    Xiao, Yuanpin
    D'souza, Melvina J.
    Hongsanan, Sinang
    Jayawardena, Ruvishika S.
    Daranagama, Dinushani A.
    Konta, Sirinapa
    Goonasekara, Ishani D.
    Zhuang, Wen-Ying
    Jeewon, Rajesh
    Phillips, Alan J. L.
    Abdel-Wahab, Mohamed A.
    Al-Sadi, Abdullah M.
    Bahkali, Ali H.
    Boonmee, Saranyaphat
    Boonyuen, Nattawut
    Cheewangkoon, Ratchadawan
    Dissanayake, Asha J.
    Kang, Jichuan
    Li, Qi-Rui
    Liu, Jian Kui
    Liu, Xing Zhong
    Liu, Zuo-Yi
    Luangsa-Ard, J. Jennifer
    Pang, Ka-Lai
    Phookamsak, Rungtiwa
    Promputtha, Itthayakorn
    Suetrong, Satinee
    Stadler, Marc
    Wen, Tingchi
    Wijayawardene, Nalin N.
    [J]. FUNGAL DIVERSITY, 2016, 79 (01) : 1 - 317
  • [32] Maharachchikumbura SSN, 2015, FUNGAL DIVERS, V72, P199, DOI [10.1007/s13225-016-0369-6, 10.1007/s13225-015-0331-z]
  • [33] Brown rot on nuts of Castanea sativa Mill: an emerging disease and its causal agent
    Maresi, Giorgio
    Longa, Claudia Maria Oliveira
    Turchetti, Tullio
    [J]. IFOREST-BIOGEOSCIENCES AND FORESTRY, 2013, 6 : 294 - 301
  • [34] Phomopsis alnea, the cause of dieback of black alder in Italy
    Moricca, S
    [J]. PLANT PATHOLOGY, 2002, 51 (06) : 755 - 764
  • [35] Mostert L, 2001, SYDOWIA, V53, P227
  • [36] Dieback of Pinus nigra Seedlings Caused by a Strain of Trichoderma viride
    Nicosia, M. G. Li Destri
    Mosca, S.
    Mercurio, R.
    Schena, L.
    [J]. PLANT DISEASE, 2015, 99 (01) : 44 - 49
  • [37] Intraspecific diversity within Diaporthe helianthi: evidence from rDNA intergenic spacer (IGS) sequence analysis
    Pecchia, S
    Mercatelli, E
    Vannacci, G
    [J]. MYCOPATHOLOGIA, 2004, 157 (03) : 317 - 326
  • [38] Differences in composition of endophytic mycobiota in twigs and leaves of healthy and declining Quercus species in Italy
    Ragazzi, A
    Moricca, S
    Capretti, P
    Dellavalle, I
    Turco, E
    [J]. FOREST PATHOLOGY, 2003, 33 (01) : 31 - 38
  • [39] Rayner R.W., 1970, MYCOLOGICAL COLOUR C
  • [40] MrBayes 3: Bayesian phylogenetic inference under mixed models
    Ronquist, F
    Huelsenbeck, JP
    [J]. BIOINFORMATICS, 2003, 19 (12) : 1572 - 1574