Ribosomal protein L7Ae is a subunit of archaeal RNase P

被引:57
作者
Cho, I-Ming [1 ,2 ,3 ]
Lai, Lien B. [1 ,3 ]
Susanti, Dwi [4 ,6 ]
Mukhopadhyay, Biswarup [4 ,5 ,6 ]
Gopalan, Venkat [1 ,2 ,3 ]
机构
[1] Ohio State Univ, Dept Biochem, Columbus, OH 43210 USA
[2] Ohio State Univ, Dept Mol Genet, Columbus, OH 43210 USA
[3] Ohio State Univ, Ctr RNA Biol, Columbus, OH 43210 USA
[4] Virginia Polytech Inst & State Univ, Virginia Bioinformat Inst, Blacksburg, VA 24061 USA
[5] Virginia Polytech Inst & State Univ, Dept Biochem & Biol Sci, Blacksburg, VA 24061 USA
[6] Virginia Polytech Inst & State Univ, Dept Genet, Bioinformat & Computat Biol Grad Program, Blacksburg, VA 24061 USA
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
pre-tRNA processing; RPP38; protein-aided RNA catalysis; PYROCOCCUS-HORIKOSHII OT3; RIBONUCLEASE-P; BOX C/D; CRYSTAL-STRUCTURE; METHANOCOCCUS-MARIPALUDIS; RIBONUCLEOPROTEIN COMPLEX; SOLUBLE-RNA; INDUCED-FIT; C5; PROTEIN; BINDING;
D O I
10.1073/pnas.1005556107
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
To the mounting evidence of nonribosomal functions for ribosomal proteins, we now add L7Ae as a subunit of archaeal RNase P, a ribonucleoprotein (RNP) that catalyzes 5'-maturation of precursor tRNAs (pre-tRNAs). We first demonstrate that L7Ae coelutes with partially purified Methanococcus maripaludis (Mma) RNase P activity. After establishing in vitro reconstitution of the single RNA with four previously known protein subunits (POP5, RPP21, RPP29, and RPP30), we show that addition of L7Ae to this RNase P complex increases the optimal reaction temperature and k(cat)/K(m) (by similar to 360-fold) for pre-tRNA cleavage to those observed with partially purified native Mma RNase P. We identify in the Mma RNase P RNA a putative kink-turn (K-turn), the structural motif recognized by L7Ae. The large stimulatory effect of Mma L7Ae on RNase P activity decreases to <= 4% of wild type upon mutating either the conserved nucleotides in this K-turn or amino acids in L7Ae shown to be essential for K-turn binding. The critical, multifunctional role of archaeal L7Ae in RNPs acting in tRNA processing (RNase P), RNA modification (H/ACA, C/D snoRNPs), and translation (ribosomes), especially by employing the same RNA-recognition surface, suggests coevolution of various translation-related functions, presumably to facilitate their coordinate regulation.
引用
收藏
页码:14573 / 14578
页数:6
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