Unveiling the genetic variation of severe continuous/mixed-type ossification of the posterior longitudinal ligament by whole-exome sequencing and bioinformatic analysis

被引:8
作者
Lee, Chang-Hyun [1 ,2 ]
Kim, Ki Tae [3 ,4 ]
Kim, Chi Heon [1 ,5 ]
Lee, Eun Young [6 ]
Lee, Sang Gu [7 ]
Seo, Myung-Eui [3 ]
Kim, Ju Han [5 ]
Chung, Chun Kee [1 ,5 ,8 ]
机构
[1] Seoul Natl Univ Hosp, Dept Neurosurg, Seoul, South Korea
[2] Seoul Natl Univ, Dept Neurosurg, Bundang Hosp, Seoul, South Korea
[3] Seoul Natl Univ, Seoul Natl Univ Biomed Informat SNUBI, Div Biomed Informat, Coll Med, Seoul, South Korea
[4] Korea Univ, Dept Lab Med, Anam Hosp, Seoul, South Korea
[5] Seoul Natl Univ, Dept Neurosurg, Coll Med, Seoul, South Korea
[6] Seoul Natl Univ, Seoul Natl Univ Hosp, Dept Internal Med, Coll Med, Seoul, South Korea
[7] Gachon Univ, Dept Neurosurg, Gil Med Ctr, Coll Med, Seongnam, South Korea
[8] Seoul Natl Univ, Dept Brain & Cognit Sci, Coll Nat Sci, Seoul, South Korea
基金
新加坡国家研究基金会;
关键词
Arthritis; CYP4B1; NLRP1; Ossification of the longitudinal ligament; SSH2; Whole exome sequencing; CERVICAL OSSIFICATION; SUSCEPTIBILITY; SPINE; ASSOCIATION; POLYMORPHISMS; LAMINOPLASTY; EXPRESSION; FRAMEWORK; PROGRESS;
D O I
10.1016/j.spinee.2021.07.005
中图分类号
R74 [神经病学与精神病学];
学科分类号
摘要
BACKGROUND CONTEXT: Ossification of the posterior longitudinal ligament (OPLL) in the cervical spine is known as a rare, complex genetic disease, its complexity being partly because OPLL is diagnosed by radiological findings regardless of clinical or genetic evaluations. Although many genes associated with susceptibility have been reported, the exact causative genes are still unknown. PURPOSE: We performed an analysis using next-generation sequencing and including only patients with a clear involved phenotype. STUDY DESIGN/SETTING: This was a case control study. PATIENT SAMPLE: A total of 74 patients with severe OPLL and 26 healthy controls were included. OUTCOME MEASURES: Causal single-nucleotide variant (SNV), gene-wise variant burden (GVB), and related pathway METHOD: We consecutively included the severe OPLL patients with continuous-/mixed-type and an occupying ratio of >= 40%, and performed whole-exome sequencing (WES) and bioinformatic analysis. Then, a validation test was performed for candidate variations. Participants were divided into 4 groups (rapidly-growing OPLL, growing rate >= 2.5%/y; slow-growing, < 2.5%/y; uncertain; and control). RESULTS: WES was performed on samples from 74 patients with OPLL (rapidly-growing, 33 patients; slow-growing, 37; and uncertain, 4) with 26 healthy controls. Analysis of 100 participants identified a newly implicated SNV and 4candidate genes based on GVB. The GVB of CYP4B1 showed a more deleterious score in the OPLL than the control group. Comparison between the rapidly growing OPLL and control groups revealed seven newly identified SNVs. We found significant association for 2 rare missense variants; rs121502220 (odds ratio [OR] = infinite; minor allele frequency [MAF] = 0.034) in NLRP1 and rs13980628 (OR= infinite; MAF = 0.032) in SSH2. The 3 genes are associated with inflammation control and arthritis, and SSH2 and NLRP1 are also related to vitamin D modulation. CONCLUSIONS: Identification of unique variants in novel genes such as CYP4B1 gene may induce the development of OPLL. In subgroup analysis, NLRP1 and SSH2 genes coding inflammation molecules may related with rapidly-growing OPLL. (C) 2021 Elsevier Inc. All rights reserved.
引用
收藏
页码:1847 / 1856
页数:10
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