共 9 条
Efficient amplification of insert end sequences from bacterial artificial chromosome clones by thermal asymmetric interlaced PCR
被引:139
作者:

Liu, YG
论文数: 0 引用数: 0
h-index: 0
机构: S China Agr Univ, Ctr Biotechnol, Guangzhou 510642, Peoples R China

Huang, N
论文数: 0 引用数: 0
h-index: 0
机构: S China Agr Univ, Ctr Biotechnol, Guangzhou 510642, Peoples R China
机构:
[1] S China Agr Univ, Ctr Biotechnol, Guangzhou 510642, Peoples R China
[2] Int Rice Res Inst, Manila 1099, Philippines
关键词:
bacterial artificial chromosome;
chromosome walking;
insert end sequences;
D O I:
10.1023/A:1007420918645
中图分类号:
Q5 [生物化学];
学科分类号:
071010 ;
081704 ;
摘要:
TAIL-PCR is a powerful tool for the recovery of DNA fragments adjacent to known sequences. A protocol is presented for the amplification of insert end sequences from bacterial artificial chromosome clones using TAIL-PCR. The amplified products are suitable as probes for chromosome walking and genome mapping and as templates for direct sequencing. The protocol has been used in rice genome studies.
引用
收藏
页码:175 / 181
页数:7
相关论文
共 9 条
[1]
DPC4, a candidate tumor suppressor gene at human chromosome 18q21.1
[J].
Hahn, SA
;
Schutte, M
;
Hoque, ATMS
;
Moskaluk, CA
;
daCosta, LT
;
Rozenblum, E
;
Weinstein, CL
;
Fischer, A
;
Yeo, CJ
;
Hruban, RH
;
Kern, SE
.
SCIENCE,
1996, 271 (5247)
:350-353

Hahn, SA
论文数: 0 引用数: 0
h-index: 0
机构: JOHNS HOPKINS UNIV,SCH MED,DEPT ONCOL,BALTIMORE,MD 21205

Schutte, M
论文数: 0 引用数: 0
h-index: 0
机构: JOHNS HOPKINS UNIV,SCH MED,DEPT ONCOL,BALTIMORE,MD 21205

Hoque, ATMS
论文数: 0 引用数: 0
h-index: 0
机构: JOHNS HOPKINS UNIV,SCH MED,DEPT ONCOL,BALTIMORE,MD 21205

Moskaluk, CA
论文数: 0 引用数: 0
h-index: 0
机构: JOHNS HOPKINS UNIV,SCH MED,DEPT ONCOL,BALTIMORE,MD 21205

daCosta, LT
论文数: 0 引用数: 0
h-index: 0
机构: JOHNS HOPKINS UNIV,SCH MED,DEPT ONCOL,BALTIMORE,MD 21205

Rozenblum, E
论文数: 0 引用数: 0
h-index: 0
机构: JOHNS HOPKINS UNIV,SCH MED,DEPT ONCOL,BALTIMORE,MD 21205

Weinstein, CL
论文数: 0 引用数: 0
h-index: 0
机构: JOHNS HOPKINS UNIV,SCH MED,DEPT ONCOL,BALTIMORE,MD 21205

Fischer, A
论文数: 0 引用数: 0
h-index: 0
机构: JOHNS HOPKINS UNIV,SCH MED,DEPT ONCOL,BALTIMORE,MD 21205

Yeo, CJ
论文数: 0 引用数: 0
h-index: 0
机构: JOHNS HOPKINS UNIV,SCH MED,DEPT ONCOL,BALTIMORE,MD 21205

Hruban, RH
论文数: 0 引用数: 0
h-index: 0
机构: JOHNS HOPKINS UNIV,SCH MED,DEPT ONCOL,BALTIMORE,MD 21205

Kern, SE
论文数: 0 引用数: 0
h-index: 0
机构: JOHNS HOPKINS UNIV,SCH MED,DEPT ONCOL,BALTIMORE,MD 21205
[2]
EFFICIENT ISOLATION AND MAPPING OF ARABIDOPSIS-THALIANA T-DNA INSERT JUNCTIONS BY THERMAL ASYMMETRIC INTERLACED PCR
[J].
LIU, YG
;
MITSUKAWA, N
;
OOSUMI, T
;
WHITTIER, RF
.
PLANT JOURNAL,
1995, 8 (03)
:457-463

LIU, YG
论文数: 0 引用数: 0
h-index: 0
机构: Mitsui Plant Biotechnology Research Institute, Tsukuba, TCI-D21 305, RITE #1 Tsukuba Laboratory

MITSUKAWA, N
论文数: 0 引用数: 0
h-index: 0
机构: Mitsui Plant Biotechnology Research Institute, Tsukuba, TCI-D21 305, RITE #1 Tsukuba Laboratory

OOSUMI, T
论文数: 0 引用数: 0
h-index: 0
机构: Mitsui Plant Biotechnology Research Institute, Tsukuba, TCI-D21 305, RITE #1 Tsukuba Laboratory

WHITTIER, RF
论文数: 0 引用数: 0
h-index: 0
机构: Mitsui Plant Biotechnology Research Institute, Tsukuba, TCI-D21 305, RITE #1 Tsukuba Laboratory
[3]
THERMAL ASYMMETRIC INTERLACED PCR - AUTOMATABLE AMPLIFICATION AND SEQUENCING OF INSERT END FRAGMENTS FROM P1 AND YAC CLONES FOR CHROMOSOME WALKING
[J].
LIU, YG
;
WHITTIER, RF
.
GENOMICS,
1995, 25 (03)
:674-681

LIU, YG
论文数: 0 引用数: 0
h-index: 0
机构:
MITSUI PLANT BIOTECHNOL RES INST,RITE TSUKUBA LAB 1,TSUKUBA,IBARAKI 305,JAPAN MITSUI PLANT BIOTECHNOL RES INST,RITE TSUKUBA LAB 1,TSUKUBA,IBARAKI 305,JAPAN

WHITTIER, RF
论文数: 0 引用数: 0
h-index: 0
机构:
MITSUI PLANT BIOTECHNOL RES INST,RITE TSUKUBA LAB 1,TSUKUBA,IBARAKI 305,JAPAN MITSUI PLANT BIOTECHNOL RES INST,RITE TSUKUBA LAB 1,TSUKUBA,IBARAKI 305,JAPAN
[4]
RAPID SEQUENCING OF UNPURIFIED PCR PRODUCTS BY THERMAL ASYMMETRIC PCR CYCLE SEQUENCING USING UNLABELED SEQUENCING PRIMERS
[J].
LIU, YG
;
MITSUKAWA, N
;
WHITTIER, RF
.
NUCLEIC ACIDS RESEARCH,
1993, 21 (14)
:3333-3334

LIU, YG
论文数: 0 引用数: 0
h-index: 0
机构:
MITSUI PLANT BIOTECHNOL RES INST,RITE TSUKUBA LAB 1,TCL-A10,SENGEN 2-6-1,TSUKUBA 305,JAPAN MITSUI PLANT BIOTECHNOL RES INST,RITE TSUKUBA LAB 1,TCL-A10,SENGEN 2-6-1,TSUKUBA 305,JAPAN

MITSUKAWA, N
论文数: 0 引用数: 0
h-index: 0
机构:
MITSUI PLANT BIOTECHNOL RES INST,RITE TSUKUBA LAB 1,TCL-A10,SENGEN 2-6-1,TSUKUBA 305,JAPAN MITSUI PLANT BIOTECHNOL RES INST,RITE TSUKUBA LAB 1,TCL-A10,SENGEN 2-6-1,TSUKUBA 305,JAPAN

WHITTIER, RF
论文数: 0 引用数: 0
h-index: 0
机构:
MITSUI PLANT BIOTECHNOL RES INST,RITE TSUKUBA LAB 1,TCL-A10,SENGEN 2-6-1,TSUKUBA 305,JAPAN MITSUI PLANT BIOTECHNOL RES INST,RITE TSUKUBA LAB 1,TCL-A10,SENGEN 2-6-1,TSUKUBA 305,JAPAN
[5]
High resolution mapping of the indica-derived rice blast resistance genes .1. Pi-b
[J].
Miyamoto, M
;
Ando, I
;
Rybka, K
;
Kodama, O
;
Kawasaki, S
.
MOLECULAR PLANT-MICROBE INTERACTIONS,
1996, 9 (01)
:6-13

Miyamoto, M
论文数: 0 引用数: 0
h-index: 0
机构: NATL INST AGROBIOL RESOURCES,TSUKUBA,IBARAKI 305,JAPAN

Ando, I
论文数: 0 引用数: 0
h-index: 0
机构: NATL INST AGROBIOL RESOURCES,TSUKUBA,IBARAKI 305,JAPAN

Rybka, K
论文数: 0 引用数: 0
h-index: 0
机构: NATL INST AGROBIOL RESOURCES,TSUKUBA,IBARAKI 305,JAPAN

Kodama, O
论文数: 0 引用数: 0
h-index: 0
机构: NATL INST AGROBIOL RESOURCES,TSUKUBA,IBARAKI 305,JAPAN

Kawasaki, S
论文数: 0 引用数: 0
h-index: 0
机构: NATL INST AGROBIOL RESOURCES,TSUKUBA,IBARAKI 305,JAPAN
[6]
CLONING AND STABLE MAINTENANCE OF 300-KILOBASE-PAIR FRAGMENTS OF HUMAN DNA IN ESCHERICHIA-COLI USING AN F-FACTOR-BASED VECTOR
[J].
SHIZUYA, H
;
BIRREN, B
;
KIM, UJ
;
MANCINO, V
;
SLEPAK, T
;
TACHIIRI, Y
;
SIMON, M
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
1992, 89 (18)
:8794-8797

SHIZUYA, H
论文数: 0 引用数: 0
h-index: 0
机构: CALTECH,DIV BIOL,14775,PASADENA,CA 91125

BIRREN, B
论文数: 0 引用数: 0
h-index: 0
机构: CALTECH,DIV BIOL,14775,PASADENA,CA 91125

KIM, UJ
论文数: 0 引用数: 0
h-index: 0
机构: CALTECH,DIV BIOL,14775,PASADENA,CA 91125

MANCINO, V
论文数: 0 引用数: 0
h-index: 0
机构: CALTECH,DIV BIOL,14775,PASADENA,CA 91125

SLEPAK, T
论文数: 0 引用数: 0
h-index: 0
机构: CALTECH,DIV BIOL,14775,PASADENA,CA 91125

TACHIIRI, Y
论文数: 0 引用数: 0
h-index: 0
机构: CALTECH,DIV BIOL,14775,PASADENA,CA 91125

SIMON, M
论文数: 0 引用数: 0
h-index: 0
机构: CALTECH,DIV BIOL,14775,PASADENA,CA 91125
[7]
Characterization and mapping of Ds-GUS-T-DNA lines for targeted insertional mutagenesis
[J].
Smith, D
;
Yanai, Y
;
Liu, YG
;
Ishiguro, S
;
Okada, K
;
Shibata, D
;
Whittier, RF
;
Fedoroff, NV
.
PLANT JOURNAL,
1996, 10 (04)
:721-732

Smith, D
论文数: 0 引用数: 0
h-index: 0
机构: CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210

Yanai, Y
论文数: 0 引用数: 0
h-index: 0
机构: CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210

Liu, YG
论文数: 0 引用数: 0
h-index: 0
机构: CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210

Ishiguro, S
论文数: 0 引用数: 0
h-index: 0
机构: CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210

Okada, K
论文数: 0 引用数: 0
h-index: 0
机构: CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210

Shibata, D
论文数: 0 引用数: 0
h-index: 0
机构: CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210

Whittier, RF
论文数: 0 引用数: 0
h-index: 0
机构: CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210

Fedoroff, NV
论文数: 0 引用数: 0
h-index: 0
机构: CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210
[8]
A transposon insertion in the Arabidopsis SSR16 gene causes an embryo-defective lethal mutation
[J].
Tsugeki, R
;
Kochieva, EZ
;
Fedoroff, NV
.
PLANT JOURNAL,
1996, 10 (03)
:479-489

Tsugeki, R
论文数: 0 引用数: 0
h-index: 0
机构:
CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210 CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210

Kochieva, EZ
论文数: 0 引用数: 0
h-index: 0
机构:
CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210 CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210

Fedoroff, NV
论文数: 0 引用数: 0
h-index: 0
机构:
CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210 CARNEGIE INST WASHINGTON,DEPT EMBRYOL,BALTIMORE,MD 21210
[9]
Construction of a bacterial artificial chromosome (BAC) library and identification of overlapping BAC clones with chromosome 4-specific RFLP markers in rice
[J].
Yang, D
;
Parco, A
;
Nandi, S
;
Subudhi, P
;
Zhu, Y
;
Wang, G
;
Huang, N
.
THEORETICAL AND APPLIED GENETICS,
1997, 95 (07)
:1147-1154

Yang, D
论文数: 0 引用数: 0
h-index: 0
机构: INT RICE RES INST,DIV PLANT BREEDING GENET & BIOCHEM,MANILA 1099,PHILIPPINES

Parco, A
论文数: 0 引用数: 0
h-index: 0
机构: INT RICE RES INST,DIV PLANT BREEDING GENET & BIOCHEM,MANILA 1099,PHILIPPINES

Nandi, S
论文数: 0 引用数: 0
h-index: 0
机构: INT RICE RES INST,DIV PLANT BREEDING GENET & BIOCHEM,MANILA 1099,PHILIPPINES

Subudhi, P
论文数: 0 引用数: 0
h-index: 0
机构: INT RICE RES INST,DIV PLANT BREEDING GENET & BIOCHEM,MANILA 1099,PHILIPPINES

Zhu, Y
论文数: 0 引用数: 0
h-index: 0
机构: INT RICE RES INST,DIV PLANT BREEDING GENET & BIOCHEM,MANILA 1099,PHILIPPINES

Wang, G
论文数: 0 引用数: 0
h-index: 0
机构: INT RICE RES INST,DIV PLANT BREEDING GENET & BIOCHEM,MANILA 1099,PHILIPPINES

Huang, N
论文数: 0 引用数: 0
h-index: 0
机构: INT RICE RES INST,DIV PLANT BREEDING GENET & BIOCHEM,MANILA 1099,PHILIPPINES