The molecular shape and the field similarities as criteria to interpret SAR studies for fragment-based design of platinum(IV) anticancer agents. Correlation of physicochemical properties with cytotoxicity

被引:5
作者
Lorenzo, Julia [2 ]
Montana, Angel M. [1 ]
机构
[1] Univ Barcelona, Unidad Quim Organ Ind & Aplicada, Dept Quim Organ, E-08028 Barcelona, Spain
[2] Univ Autonoma Barcelona, Inst Biotecnol & Biomed Vicent Villar Palasi, E-08193 Barcelona, Spain
关键词
Platinum-based drugs; Anticancer agents; Cytotoxicity; Structure-activity relationship; Shape and field similarity; XED field; Drug likeness; Structure-related molecular properties; Stereo-electronic effects; DENSITY-FUNCTIONAL THEORY; GAUSSIAN-TYPE BASIS; POLAR SURFACE-AREA; CANCER-CELL-LINES; SYNTHETIC METHODOLOGY; TERTIARY STRUCTURES; ANTITUMOR-ACTIVITY; CARRIER LIGANDS; ORBITAL METHODS; COMPLEXES;
D O I
10.1016/j.jmgm.2016.07.010
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Molecular shape similarity and field similarity have been used to interpret, in a qualitative way, the structure-activity relationships in a selected series of platinum(IV) complexes with anticancer activity. MM and QM calculations have been used to estimate the electron density, electrostatic potential maps, partial charges, dipolar moments and other parameters to correlate the stereo-electronic properties with the differential biological activity of complexes. Extended Electron Distribution (XED) field similarity has been also evaluated for the free 1,4-diamino carrier ligands, in a fragment-based drug design approach, comparing Connolly solvent excluded surface, hydrophobicity field surface, Van der Waals field surface, nucleophilicity field surface, electrophilicity field surface and the extended electron-distribution maxima field points. A consistency has been found when comparing the stereo-electronic properties of the studied series of platinum(IV) complexes and/or the free ligands evaluated and their in vitro anticancer activity. (C) 2016 Elsevier Inc. All rights reserved.
引用
收藏
页码:39 / 60
页数:22
相关论文
共 101 条
  • [1] Synthesis and characterization of platinum(IV) anticancer drugs with functionalized aromatic carboxylate ligands: Influence of the ligands on drug efficacies and uptake
    Ang, WH
    Pilet, S
    Scopelliti, R
    Bussy, F
    Juillerat-Jeanneret, L
    Dyson, PJ
    [J]. JOURNAL OF MEDICINAL CHEMISTRY, 2005, 48 (25) : 8060 - 8069
  • [2] [Anonymous], 2016, CALCULATED CHEMAXONS
  • [3] Synthesis, DFT calculations and cytotoxic investigation of platinum complexes with 3-thiolanespiro-5′-hydantoin and 4-thio-1H-tetrahydropyranespiro-5′-hydantoin
    Bakalova, Adriana
    Buyukliev, Rossen
    Momekov, Georgi
    [J]. JOURNAL OF MOLECULAR STRUCTURE, 2015, 1091 : 118 - 124
  • [4] DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE
    BECKE, AD
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) : 5648 - 5652
  • [5] New Drugs in Cancer Therapy, National Tumor Institute, Naples, 17-18 June 2004
    Caponigro, F
    Basile, M
    de Rosa, V
    Normanno, N
    [J]. ANTI-CANCER DRUGS, 2005, 16 (02) : 211 - 221
  • [6] The Relevance of Polar Surface Area (PSA) in Rationalizing Biological Properties of Several cis-Diamminemalonatoplatinum(II) Derivatives
    Caron, Giulia
    Ermondi, Giuseppe
    Gariboldi, Marzia B.
    Monti, Elena
    Gabano, Elisabetta
    Ravera, Mauro
    Osella, Domenico
    [J]. CHEMMEDCHEM, 2009, 4 (10) : 1677 - 1685
  • [7] GPU Linear Algebra Libraries and GPGPU Programming for Accelerating MOPAC Semiempirical Quantum Chemistry Calculations
    Carvalho Maia, Julio Daniel
    Urquiza Carvalho, Gabriel Aires
    Mangueira, Carlos Peixoto, Jr.
    Santana, Sidney Ramos
    Formiga Cabral, Lucidio Anjos
    Rocha, Gerd B.
    [J]. JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2012, 8 (09) : 3072 - 3081
  • [8] Detection of Binding Site Molecular Interaction Field Similarities
    Chartier, Matthieu
    Najmanovich, Rafael
    [J]. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2015, 55 (08) : 1600 - 1615
  • [9] Molecular field extrema as descriptors of biological activity: Definition and validation
    Cheeseright, T
    Mackey, M
    Rose, S
    Vinter, A
    [J]. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2006, 46 (02) : 665 - 676
  • [10] Cheeseright TJ, 2011, CURR COMPUT-AID DRUG, V7, P190