Sarment:: Python']Python modules for HMM analysis and partitioning of sequences

被引：17
|
作者：
Guéguen, L [1 ]
机构：
[1] Univ Lyon 1, Lab Biometrie & Biol Evolut, NRS, UMR 5558, F-69622 Villeurbanne, France
来源：
BIOINFORMATICS | 2005年 / 21卷 / 16期
关键词：
D O I：
10.1093/bioinformatics/bti533
中图分类号：
Q5 [生物化学];
学科分类号：
071010 ; 081704 ;
摘要：
Sarment is a package of Python modules for easy building and manipulation of sequence segmentations. It provides efficient implementation of usual algorithms for hidden Markov Model computation, as well as for maximal predictive partitioning. Owing to its very large variety of criteria for computing segmentations, Sarment can handle many kinds of models. Because of object-oriented programming, the results of the segmentation are very easy to manipulate.
引用
收藏
页码：3427 / 3428
页数：2
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