Coleus blumei viroid 7: a novel viroid resulting from genome recombination between Coleus blumei viroids 1 and 5

被引:4
作者
Smith, Ryan L. [1 ,2 ]
Shukla, Manisha [1 ]
Creelman, Alexa [1 ]
Lawrence, Janice [2 ]
Singh, Mathuresh [3 ]
Xu, Huimin [4 ]
Li, Xiang [4 ]
Gardner, Kyle [1 ]
Nie, Xianzhou [1 ]
机构
[1] Agr & Agri Food Canada, Fredericton Res & Dev Ctr, 850 Lincoln Rd, Fredericton, NB E3B 4Z7, Canada
[2] Univ New Brunswick, Dept Biol, POB 4400, Fredericton, NB E3B 5A3, Canada
[3] Agr Certificat Serv, 1030 Lincoln Rd, Fredericton, NB E3B 8B7, Canada
[4] Canadian Food Inspect Agcy, Charlottetown Lab, 93 Mt Edward Rd, Charlottetown, PE C1A 5T1, Canada
关键词
1ST REPORT; MOLECULAR CHARACTERIZATION; COMMERCIAL COLEUS;
D O I
10.1007/s00705-021-05201-z
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The genus Coleviroid, family Pospiviroidae, comprises six known viroids, all infecting Plectranthus scutellarioides (Coleus blumei; coleus). In 2017, a novel viroid-like RNA sequence that shares ca. 65% identity with Coleus blumei viroid 1 (CbVd-1) was identified in a coleus cultivar infected by multiple coleviroids. Further sequence and secondary structure analyses are consistent with the discovery of a seventh viroid in the genus Coleviroid: tentatively named "Coleus blumei viroid 7" (CbVd-7). The viroid appears to be the product of a natural recombination event between CbVd-1 and Coleus blumei viroid 5. We prove CbVd-7 to be infectious and in turn demonstrate the ability of all known coleviroid left- and right-arm segments to recombine. With a length of 234 nucleotides, this is the smallest viroid described to date.
引用
收藏
页码:3157 / 3163
页数:7
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