Fluorescence microscopy three-dimensional depth variant point spread function interpolation using Zernike moments

被引:31
作者
Maalouf, Elie [1 ]
Colicchio, Bruno [1 ]
Dieterlen, Alain [1 ]
机构
[1] Univ Haute Alsace, Modelisat Intelligence Processus & Syst Lab, Inst Univ Technol Mulhouse, F-68093 Mulhouse, France
关键词
OPTICAL-SECTIONING MICROSCOPY; DECONVOLUTION MICROSCOPY; CONFOCAL MICROSCOPY; FAST COMPUTATION; LIGHT; MODEL; RESTORATION; DIFFRACTION; PARAMETERS; ALGORITHM;
D O I
10.1364/JOSAA.28.001864
中图分类号
O43 [光学];
学科分类号
070207 ; 0803 ;
摘要
In three-dimensional fluorescence microscopy the point spread function (PSF) changes with depth, inducing errors in the restored images when these variations are neglected during the deconvolution of thick specimens. Some deconvolution algorithms have been developed to take the depth variations of the PSF into consideration. For these algorithms, the accuracy of the estimated structures depends on the knowledge of the PSF at various depths. We propose an alternative to measuring all required PSFs at different depths. The needed PSFs are interpolated from a limited measured PSF set using a method based on Zernike moments. The proposed method offers the possibility to obtain an accurate PSF interpolation at different depths using only a few measured ones. (C) 2011 Optical Society of America
引用
收藏
页码:1864 / 1870
页数:7
相关论文
共 31 条
[21]   Fast iterative image restoration with a spatially-varying PSF [J].
Nagy, JG ;
OLeary, DP .
ADVANCED SIGNAL PROCESSING: ALGORITHMS, ARCHITECTURES, AND IMPLEMENTATIONS VII, 1997, 3162 :388-399
[22]   Forward: Fourier-Wavelet regularized deconvolution for Ill-conditioned systems [J].
Neelamani, R ;
Choi, H ;
Baraniuk, R .
IEEE TRANSACTIONS ON SIGNAL PROCESSING, 2004, 52 (02) :418-433
[23]   On the recovery of a function on a circular domain [J].
Pawlak, M ;
Liao, SX .
IEEE TRANSACTIONS ON INFORMATION THEORY, 2002, 48 (10) :2736-2753
[24]   Depth-variant maximum-likelihood restoration for three-dimensional fluorescence microscopy [J].
Preza, C ;
Conchello, JA .
JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION, 2004, 21 (09) :1593-1601
[25]   Image estimation accounting for point-spread function depth variation in three-dimensional fluorescence microscopy [J].
Preza, C ;
Conchello, JA .
THREE-DIMENSIONAL AND MULTIDIMENSIONAL MICROSCOPY: IMAGE ACQUISITION AND PROCESSING X, 2003, 4964 :135-142
[26]   Deconvolution methods for 3-D fluorescence microscopy images [J].
Sarder, P ;
Nehorai, A .
IEEE SIGNAL PROCESSING MAGAZINE, 2006, 23 (03) :32-45
[27]   Enhanced three-dimensional deconvolution microscopy using a measured depth-varying point-spread function [J].
Shaevitz, Joshua W. ;
Fletcher, Daniel A. .
JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION, 2007, 24 (09) :2622-2627
[28]   IMAGE-ANALYSIS VIA THE GENERAL-THEORY OF MOMENTS [J].
TEAGUE, MR .
JOURNAL OF THE OPTICAL SOCIETY OF AMERICA, 1980, 70 (08) :920-930
[29]   ELECTROMAGNETIC DIFFRACTION OF LIGHT FOCUSED THROUGH A PLANAR INTERFACE BETWEEN MATERIALS OF MISMATCHED REFRACTIVE-INDEXES - AN INTEGRAL-REPRESENTATION [J].
TOROK, P ;
VARGA, P ;
LACZIK, Z ;
BOOKER, GR .
JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION, 1995, 12 (02) :325-332
[30]   Image adaptive point-spread function estimation and deconvolution for in vivo confocal microscopy [J].
Von Tiedemann, M ;
Fridberger, A ;
Ulfendahl, M ;
De Monvel, JB .
MICROSCOPY RESEARCH AND TECHNIQUE, 2006, 69 (01) :10-20