Predictive Engineering of Class I Terpene Synthases Using Experimental and Computational Approaches

被引:9
|
作者
Leferink, Nicole G. H. [1 ]
Scrutton, Nigel S. [1 ]
机构
[1] Univ Manchester, Future Biomfg Res Hub, Manchester Inst Biotechnol, Dept Chem,Sch Nat Sci, 131 Princess St, Manchester M1 7DN, Lancs, England
基金
英国生物技术与生命科学研究理事会; 英国工程与自然科学研究理事会;
关键词
computational chemistry; functional plasticity; protein engineering; terpene synthases; terpenoids; BORNYL DIPHOSPHATE SYNTHASE; SESQUITERPENE SYNTHASE; ESCHERICHIA-COLI; MONOTERPENE SYNTHASE; STRUCTURAL-CHARACTERIZATION; (+)-LIMONENE SYNTHASE; DIRECTED MUTAGENESIS; PENTALENENE SYNTHASE; CONSERVED ASPARTATE; FUNCTIONAL-ANALYSIS;
D O I
10.1002/cbic.202100484
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Terpenoids are a highly diverse group of natural products with considerable industrial interest. Increasingly, engineered microbes are used for the production of terpenoids to replace natural extracts and chemical synthesis. Terpene synthases (TSs) show a high level of functional plasticity and are responsible for the vast structural diversity observed in natural terpenoids. Their relatively inert active sites guide intrinsically reactive linear carbocation intermediates along one of many cyclisation paths via exertion of subtle steric and electrostatic control. Due to the absence of a strong protein interaction with these intermediates, there is a remarkable lack of sequence-function relationship within the TS family, making product-outcome predictions from sequences alone challenging. This, in combination with the fact that many TSs produce multiple products from a single substrate hampers the design and use of TSs in the biomanufacturing of terpenoids. This review highlights recent advances in genome mining, computational modelling, high-throughput screening, and machine-learning that will allow more predictive engineering of these fascinating enzymes in the near future.
引用
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页数:13
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