The different catalytic roles of the metal-binding ligands in human 4-hydroxyphenylpyruvate dioxygenase

被引:11
作者
Huang, Chih-Wei [1 ,2 ]
Liu, Hsiu-Chen [3 ]
Shen, Chia-Pei [3 ]
Chen, Yi-Tong [3 ]
Lee, Sung-Jai [3 ]
Lloyd, Matthew D. [4 ]
Lee, Hwei-Jen [3 ]
机构
[1] Kaohsiung Armed Forces Gen Hosp, Pharm Div, Kaohsiung, Taiwan
[2] Natl Def Med Ctr, Grad Inst Med Sci, Taipei, Taiwan
[3] Natl Def Med Ctr, Dept Biochem, Taipei 10764, Taiwan
[4] Univ Bath, Med Chem, Dept Pharm & Pharmacol, Bath BA2 7AY, Avon, England
关键词
2-His-1-carboxylate facial triad; 4-hydroxyphenylpyruvate dioxygenase; iron-binding ligands; metal-binding motif; non-haem Fe(II)-dependent oxygenase; TAURINE/ALPHA-KETOGLUTARATE DIOXYGENASE; P-HYDROXYPHENYLPYRUVATE DIOXYGENASE; DEACETOXYCEPHALOSPORIN C SYNTHASE; 2-HIS-1-CARBOXYLATE FACIAL TRIAD; CLEAVING CATECHOLIC DIOXYGENASE; CLAVAMINIC ACID SYNTHASE; NONHEME IRON(II) ENZYMES; TYROSINEMIA TYPE-I; CRYSTAL-STRUCTURE; (4-HYDROXYPHENYL)PYRUVATE DIOXYGENASE;
D O I
10.1042/BCJ20160146
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
4-Hydroxyphenylpyruvate dioxygenase (HPPD) is a non-haem iron(II)-dependent oxygenase that catalyses the conversion of 4-hydroxyphenylpyruvate (HPP) to homogentisate (HG). In the active site, a strictly conserved 2-His-1-Glu facial triad coordinates the iron ready for catalysis. Substitution of these residues resulted in about a 10-fold decrease in the metal binding affinity, as measured by isothermal titration calorimetry, and a large reduction in enzyme catalytic efficiencies. The present study revealed the vital role of the ligand Glu(349) in enzyme function. Replacing this residue with alanine resulted in loss of activity. The E349G variant retained 5% activity for the coupled reaction, suggesting that co-ordinating water may be able to support activation of the trans-bound dioxygen upon substrate binding. The reaction catalysed by the H183A variant was fully uncoupled. H183A variant catalytic activity resulted in protein cleavage between Ile(267) and Ala(268) and the production of an N-terminal fragment. The H266A variant was able to produce 4-hydroxyphenylacetate (HPA), demonstrating that decarboxylation had occurred but that there was no subsequent product formation. Structural modelling of the variant enzyme with bound dioxygen revealed the rearrangement of the coordination environment and the dynamic behaviour of bound dioxygen in the H266A and H183A variants respectively. These models suggest that the residues regulate the geometry of the reactive oxygen intermediate during the oxidation reaction. The mutagenesis and structural simulation studies demonstrate the critical and unique role of each ligand in the function of HPPD, and which correlates with their respective co-ordination position.
引用
收藏
页码:1179 / 1189
页数:11
相关论文
共 52 条
[1]   Crystal structure of the non-haem iron halogenase SyrB2 in syringomycin biosynthesis [J].
Blasiak, LC ;
Vaillancourt, FH ;
Walsh, CT ;
Drennan, CL .
NATURE, 2006, 440 (7082) :368-371
[2]  
BRADLEY FC, 1986, J BIOL CHEM, V261, P1693
[3]   Structure of the ferrous form of (4-hydroxyphenyl)pyruvate dioxygenase from Streptomyces avermitilis in complex with the therapeutic herbicide, NTBC [J].
Brownlee, JM ;
Johnson-Winters, K ;
Harrison, DHT ;
Moran, GR .
BIOCHEMISTRY, 2004, 43 (21) :6370-6377
[4]   Two roads diverged:: The structure of hydroxymandelate synthase from Amycolatopsis orientalis in complex with 4-hydroxymandelate [J].
Brownlee, June ;
He, Panqing ;
Moran, Graham R. ;
Harrison, David H. T. .
BIOCHEMISTRY, 2008, 47 (07) :2002-2013
[5]   Auto-hydroxylation of FIH-1:: an Fe(II), α-ketoglutarate-dependent human hypoxia sensor [J].
Chen, Yuan-Han ;
Comeaux, Lindsay M. ;
Eyles, Stephen J. ;
Knapp, Michael J. .
CHEMICAL COMMUNICATIONS, 2008, (39) :4768-4770
[6]   A mechanistic rationalisation for the substrate specificity of recombinant mammalian 4-hydroxyphenylpyruvate dioxygenase (4-HPPD) [J].
Crouch, NP ;
Adlington, RM ;
Baldwin, JE ;
Lee, MH ;
MacKinnon, CH .
TETRAHEDRON, 1997, 53 (20) :6993-7010
[7]   Activation of α-Keto Acid-Dependent Dioxygenases: Application of an {FeNO}7/{FeO2}8 Methodology for Characterizing the Initial Steps of O2 Activation [J].
Diebold, Adrienne R. ;
Brown-Marshall, Christina D. ;
Neidig, Michael L. ;
Brownlee, June M. ;
Moran, Graham R. ;
Solomon, Edward I. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2011, 133 (45) :18148-18160
[8]   Mutagenesis studies on the iron binding ligands of clavaminic acid synthase [J].
Doan, LX ;
Hassan, A ;
Lipscomb, SJ ;
Dhanda, A ;
Zhang, ZH ;
Schofield, CJ .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2000, 279 (01) :240-244
[9]   Structure of factor-inhibiting hypoxia-inducible factor (HIF) reveals mechanism of oxidative modification of HIF-1α [J].
Elkins, JM ;
Hewitson, KS ;
McNeill, LA ;
Seibel, JF ;
Schlemminger, I ;
Pugh, CW ;
Ratcliffe, PJ ;
Schofield, CJ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (03) :1802-1806
[10]   X-ray crystal structure of Escherichia coli taurine/α-ketoglutarate dioxygenase complexed to ferrous iron and substrates [J].
Elkins, JM ;
Ryle, MJ ;
Clifton, IJ ;
Hotopp, JCD ;
Lloyd, JS ;
Burzlaff, NI ;
Baldwin, JE ;
Hausinger, RP ;
Roach, PL .
BIOCHEMISTRY, 2002, 41 (16) :5185-5192