The crystal structure of 1,2,3,4,6-penta-O-benzoyl-α-D-mannopyranose:: observation of C-H•••π interaction as a surrogate to O-H•••O interaction of a free sugar

被引:13
作者
Muktha, B
Srinivas, O
Amresh, MR
Row, TNG [1 ]
Jayaraman, N
Sekar, K
机构
[1] Indian Inst Sci, Dept Organ Chem, Bangalore 560012, Karnataka, India
[2] Indian Inst Sci, Bioinformat Ctr, Bangalore 560012, Karnataka, India
[3] Indian Inst Sci, Solid State & Struct Chem Unit, Bangalore 560012, Karnataka, India
关键词
conformation; crystal structures; C-H center dot center dot center dot pi interaction; hydrogen bonding; alpha-D-mannose; pyranose;
D O I
10.1016/S0008-6215(03)00340-9
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The crystal structure of the title compound was determined by X-ray crystallography. The compound crystallized in the orthorhombic space group P2(1)2(1)2(1) with four molecules in the unit cell with a = 9.170(2), b = 9.873 (2), c = 38.831(8) A. The structure was refined to a R index of 0.041 for 7907 independent reflections. The mannopyranose unit adopts a distorted C-4(1) conformation. The structure depicts unique network of C-H (...)pi interactions, very closely resembling the pattern of O-H O-... interactions in free sugars. This intriguing and rare observation points to a notion that the supramolecular organization pertaining to a sugar is in-built in the pyranose ring itself. (C) 2003 Elsevier Ltd. All rights reserved.
引用
收藏
页码:2005 / 2011
页数:7
相关论文
共 27 条
[1]  
[Anonymous], 1998, BRUK SMART SAINT
[2]   ANOMERIC BOND-CHARACTER IN PYRANOSE SUGARS [J].
BERMAN, HM ;
CHU, SSC ;
JEFFREY, GA .
SCIENCE, 1967, 157 (3796) :1576-&
[3]   Halogen trimer synthons in crystal engineering:: low-temperature X-ray and neutron diffraction study of the 1:1 complex of 2,4,6-tris(4-chlorophenoxy)-1,3,5-triazine with tribromobenzene [J].
Broder, CK ;
Howard, JAK ;
Keen, DA ;
Wilson, CC ;
Allen, FH ;
Jetti, RKR ;
Nangia, A ;
Desiraju, GR .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE CRYSTAL ENGINEERING AND MATERIALS, 2000, 56 (06) :1080-1084
[4]   A SURVEY OF O-H ... O HYDROGEN-BOND GEOMETRIES DETERMINED BY NEUTRON-DIFFRACTION [J].
CECCARELLI, C ;
JEFFREY, GA ;
TAYLOR, R .
JOURNAL OF MOLECULAR STRUCTURE, 1981, 70 (JAN) :255-271
[5]   GENERAL DEFINITION OF RING PUCKERING COORDINATES [J].
CREMER, D ;
POPLE, JA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1975, 97 (06) :1354-1358
[6]  
Desiraju G. R., 1999, The Weak Hydrogen Bond
[7]   Aromatic interactions [J].
Hunter, CA ;
Lawson, KR ;
Perkins, J ;
Urch, CJ .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 2001, (05) :651-669
[8]   THE HYDROGEN-BONDING PATTERNS IN THE PYRANOSE AND PYRANOSIDE CRYSTAL-STRUCTURES [J].
JEFFREY, GA ;
MITRA, J .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1983, 39 (AUG) :469-480
[10]   STEREOGRAPHIC REPRESENTATION OF THE CREMER-POPLE RING-PUCKERING PARAMETERS FOR PYRANOID RINGS [J].
JEFFREY, GA ;
YATES, JH .
CARBOHYDRATE RESEARCH, 1979, 74 (SEP) :319-322