Thermodynamics of ligand binding to P4502B4 and P450eryF studied by isothermal titration calorimetry

被引:14
作者
Muralidhara, B. K. [1 ]
Halpert, James R. [1 ]
机构
[1] Univ Texas, Med Branch, Dept Pharmacol & Interdisciplinary Toxicol, Galveston, TX 77555 USA
关键词
P450; flexibility; drug metabolism; thermodynamic signatures; allostery; isothermal titration calorimetry; heat capacity; drug-drug interactions; structure-based drug design;
D O I
10.1080/03602530701498182
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Structural plasticity and cooperativity in ligand recognition are two key aspects of the catalytic diversity of eytochrome P450 enzymes. As more mammalian P450 crystal structures have emerged, computational modeling has become a major tool to predict drug metabolism and interactions. There is a need for real solution thermodynamic data to support modeling and crystallographic observations. Using isothermal titration calorimetry (ITC) we successfully evaluated the conformational flexibility of P450 2114 in binding imidazole inhibitors of different size and chemistry and dissected the stoichiometry and energetics of ligand binding allostery in P450eryF. Thermodynamic signatures obtained by ITC nicely correlated with structural and modeling results. Thus, ITC is a powerful tool to study structure-function relationships in P450s.
引用
收藏
页码:539 / 556
页数:18
相关论文
共 83 条
[1]   Heterogeneity of toxicant response: Sources of human variability [J].
Aldridge, JE ;
Gibbons, JA ;
Flaherty, MM ;
Kreider, ML ;
Romano, JA ;
Levin, ED .
TOXICOLOGICAL SCIENCES, 2003, 76 (01) :3-20
[2]  
AMULPHI C, 2004, BIOCHEMISTRY-US, V43, P12258
[3]   Calorimetric measurement of phospholipid interaction with methyl-β-cyclodextrin [J].
Anderson, TG ;
Tan, A ;
Ganz, P ;
Seelig, J .
BIOCHEMISTRY, 2004, 43 (08) :2251-2261
[4]   Implications of the allosteric kinetics of cytochrome P450s [J].
Atkins, WM .
DRUG DISCOVERY TODAY, 2004, 9 (11) :478-484
[5]   Allosteric behavior in cytochrome P450-dependent in vitro drug-drug interactions: A prospective based on conformational dynamics [J].
Atkins, WM ;
Wang, RW ;
Lu, AYH .
CHEMICAL RESEARCH IN TOXICOLOGY, 2001, 14 (04) :338-347
[6]   Homotropic cooperativity of monomeric cytochrome P450 3A4 in a nanoscale native bilayer environment [J].
Baas, BJ ;
Denisov, IG ;
Sliger, SG .
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 2004, 430 (02) :218-228
[7]   Single-molecule height measurements on microsomal cytochrome P450 in nanometer-scale phospholipid bilayer disks [J].
Bayburt, TH ;
Sligar, SG .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (10) :6725-6730
[8]  
BAYBURT TH, 2007, J BIOL CHEM 0329
[9]   Identification of the binding site on cytochrome P450 2B4 for cytochrome b5 and cytochrome P450 reductase [J].
Bridges, A ;
Gruenke, L ;
Chang, YT ;
Vakser, IA ;
Loew, G ;
Waskell, L .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (27) :17036-17049
[10]   Crystal structures of ligand complexes of P450eryF exhibiting homotropic cooperativity [J].
Cupp-Vickery, J ;
Anderson, R ;
Hatziris, Z .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (07) :3050-3055