Individuals diagnosed with Crohn's disease are at an increased risk for developing low bone density. The exact cause of low bone mineral density in Crohn's disease patients has not been determined. The purpose of this study was to assess the incidence of low bone mineral density in premenopausal women with Crohn's disease and to determine the role diet plays in bone mineral density for this population. Bone mineral density of the lumbar spine (L2-L4), proximal femur, and forearm was measured in 51 female controls and 50 females with Crohn's disease using dual energy X-ray absorptiometry (Lunar DPX-Plus, Madison, WI). Dietary intake for all Crohn's disease participants was analyzed using both 3-d dietary records and a food frequency questionnaire. When compared to healthy controls, bone mineral density values of Crohn's disease participants were decreased for ail sites, particularly the spine (1.169 +/- 0.114, p = 0.054), Ward's area (0.831 +/- 0.128, p = 0.052), and the femoral neck (0.927 +/- 0.100, p = 0.01). Factors associated with lower bone density in Crohn's participants were weight, corticosteroid usage, length and age of diagnosis, history and length of resection, and dietary intakes of magnesium, copper, magnesium, vitamin K, and zinc. The results of this study indicate for the first time that diet plays a role in the development of low bone density in premenopausal women with Crohn's disease.