Alternative Strategies for Microbial Remediation of Pollutants via Synthetic Biology

被引:91
作者
Jaiswal, Shweta [1 ]
Shukla, Pratyoosh [1 ]
机构
[1] Maharshi Dayanand Univ, Dept Microbiol, Enzyme Technol & Prot Bioinformat Lab, Rohtak, Haryana, India
关键词
synthetic biology; bioremediation; xenobiotics; genetic circuit; biosensor; PSEUDOMONAS-PUTIDA KT2440; WHITE-ROT FUNGI; NEXT-GENERATION; METAGENOMIC ANALYSIS; METHYL PARATHION; SYSTEMS BIOLOGY; BIOREMEDIATION; DEGRADATION; GENES; BIODEGRADATION;
D O I
10.3389/fmicb.2020.00808
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Continuous contamination of the environment with xenobiotics and related recalcitrant compounds has emerged as a serious pollution threat. Bioremediation is the key to eliminating persistent contaminants from the environment. Traditional bioremediation processes show limitations, therefore it is necessary to discover new bioremediation technologies for better results. In this review we provide an outlook of alternative strategies for bioremediation via synthetic biology, including exploring the prerequisites for analysis of research data for developing synthetic biological models of microbial bioremediation. Moreover, cell coordination in synthetic microbial community, cell signaling, and quorum sensing as engineered for enhanced bioremediation strategies are described, along with promising gene editing tools for obtaining the host with target gene sequences responsible for the degradation of recalcitrant compounds. The synthetic genetic circuit and two-component regulatory system (TCRS)-based microbial biosensors for detection and bioremediation are also briefly explained. These developments are expected to increase the efficiency of bioremediation strategies for best results.
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页数:14
相关论文
共 212 条
[51]   Bioremediation potential of microorganisms derived from petroleum reservoirs [J].
Dellagnezze, Bruna Martins ;
de Sousa, Gabriel Vasconcelos ;
Martins, Laercio Lopes ;
Domingos, Daniela Ferreira ;
Limache, Elmer E. G. ;
de Vasconcellos, Suzan Pantaroto ;
da Cruz, Georgiana Feitosa ;
de Oliveira, Valeria Maia .
MARINE POLLUTION BULLETIN, 2014, 89 (1-2) :191-200
[52]   Advances in molecular and "-omics" technologies to gauge microbial communities and bioremediation at xenobiotic/anthropogen contaminated sites [J].
Desai, Chirayu ;
Pathak, Hilor ;
Madamwar, Datta .
BIORESOURCE TECHNOLOGY, 2010, 101 (06) :1558-1569
[53]  
Dhar D, 2020, TOOLS, TECHNIQUES AND PROTOCOLS FOR MONITORING ENVIRONMENTAL CONTAMINANTS, P207, DOI 10.1016/B978-0-12-814679-8.00010-8
[54]   Functional soil metagenomics: elucidation of polycyclic aromatic hydrocarbon degradation potential following 12 years of in situ bioremediation [J].
Duarte, Marcia ;
Nielsen, Agnes ;
Camarinha-Silva, Amelia ;
Vilchez-Vargas, Ramiro ;
Bruls, Thomas ;
Wos-Oxley, Melissa L. ;
Jauregui, Ruy ;
Pieper, Dietmar H. .
ENVIRONMENTAL MICROBIOLOGY, 2017, 19 (08) :2992-3011
[55]   Bioremediation 3.0: Engineering pollutant-removing bacteria in the times of systemic biology [J].
Dvorak, Pavel ;
Nikel, Pablo I. ;
Damborsky, Jiri ;
de Lorenzo, Victor .
BIOTECHNOLOGY ADVANCES, 2017, 35 (07) :845-866
[56]   Immobilized Synthetic Pathway for Biodegradation of Toxic Recalcitrant Pollutant 1,2,3-Trichloropropane [J].
Dvorak, Pavel ;
Bidmanova, Sarka ;
Damborsky, Jiri ;
Prokop, Zbynek .
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2014, 48 (12) :6859-6866
[57]   "Omics" Insights into PAH Degradation toward Improved Green Remediation Biotechnologies [J].
El Amrani, Abdelhak ;
Dumas, Anne-Sophie ;
Wick, Lukas Y. ;
Yergeau, Etienne ;
Berthome, Richard .
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2015, 49 (19) :11281-11291
[58]  
El Zanfaly H. T., 2019, BIOTECHNOLOGY CONTRI
[59]  
Enriquez P., 2016, VANDERBILT J ENTERTA, V19, P603
[60]   Pb, Cd, and Zn soil contamination: Monitoring functional and structural impacts on the microbiome [J].
Fajardo, Carmen ;
Costa, Gonzalo ;
Nande, Mar ;
Botias, Pedro ;
Garcia-Cantalejo, Jesus ;
Martin, Margarita .
APPLIED SOIL ECOLOGY, 2019, 135 :56-64