Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily

被引：58

作者：

Bingle, Colin D. ^{[2
]}

Seal, Ruth L. ^{[3
]}

Craven, C. Jeremy ^{[1
]}

机构：

[1] Univ Sheffield, Dept Mol Biol & Biotechnol, Krebs Inst Biomol Res, Sheffield S10 2TN, S Yorkshire, England

[2] Univ Sheffield, Dept Infect & Immun, Acad Unit Resp Med, Sheffield S10 2JF, S Yorkshire, England

[3] European Bioinformat Inst EMBL EBI, Hinxton CB10 1SA, Cambs, England

来源：

BIOCHEMICAL SOCIETY TRANSACTIONS | 2011年 / 39卷

关键词：

cognate representative nomenclature; palate; lung and nasal epithelium clone (PLUNC); phylogenetic tree; SALIVARY PROTEIN; BINDING PROTEINS; FAMILY PROTEINS; CLONING; PLUNC; CATTLE; IDENTIFICATION; EPITHELIUM; DISPLAY; MEMBERS;

D O I：

10.1042/BST0390977

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

We present the BPIFAn/BPIFBn systematic nomenclature for the PLUNC (palate lung and nasal epithelium clone)/PSP (parotid secretory protein)/BSP30 (bovine salivary protein 30)/SMGB (submandibular gland protein B) family of proteins, based on an adaptation of the SPLUNCn (short PLUNCn)/LPLUNCn (large PLUNCn) nomenclature. The nomenclature is applied to a set of 102 sequences which we believe represent the current reliable data for BPIFA/BPIFB proteins across all species, including marsupials and birds. The nomenclature will be implemented by the HGNC (HUGO Gene Nomenclature Committee).

引用

页码：977 / 983

页数：7

共 24 条

[1] Psp and Smgb:: a model for developmental and functional regulation in the rat major salivary glands [J].

Ball, WD ;

Mirels, L ;

Hand, AR .

BIOCHEMICAL SOCIETY TRANSACTIONS, 2003, 31 :777-780

[2] Phylogenetic and evolutionary analysis of the PLUNC gene family [J].

Bingle, CD ;

Leclair, EE ;

Havard, S ;

Bingle, L ;

Gillingham, P ;

Craven, CJ .

PROTEIN SCIENCE, 2004, 13 (02) :422-430

[3] PLUNC: A novel family of candidate host defence proteins expressed in the upper airways and nasopharynx [J].

Bingle, CD ;

Craven, CJ .

HUMAN MOLECULAR GENETICS, 2002, 11 (08) :937-943

[4] Distant cousins: genomic and sequence diversity within the BPI fold-containing (BPIF)/PLUNC protein family [J].

Bingle, Colin D. ;

Bingle, Lynne ;

Craven, C. Jeremy .

BIOCHEMICAL SOCIETY TRANSACTIONS, 2011, 39 :961-965

[5] Identification and characterisation of the BPI/LBP/PLUNC-like gene repertoire in chickens reveals the absence of a LBP gene [J].

Chiang, Shih-Chieh ;

Veldhuizen, Edwin J. A. ;

Barnes, Frances A. ;

Craven, C. Jeremy ;

Haagsman, Henk P. ;

Bingle, Colin D. .

DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY, 2011, 35 (03) :285-295

[6] NOVEL GENES FOR POTENTIAL LIGAND-BINDING PROTEINS IN SUBREGIONS OF THE OLFACTORY MUCOSA [J].

DEAR, TN ;

BOEHM, T ;

KEVERNE, EB ;

RABBITTS, TH .

EMBO JOURNAL, 1991, 10 (10) :2813-2819

[7] Discovery of the breast cancer gene BASE using a molecular approach to enrich for genes encoding membrane and secreted proteins [J].

Egland, KA ;

Vincent, JJ ;

Strausberg, R ;

Lee, B ;

Pastan, I .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (03) :1099-1104

[8] Cloning of ovocalyxin-36, a novel chicken eggshell protein related to lipopolysaccharide-binding proteins, bactericidal permeability-increasing proteins, and plunc family proteins [J].

Gautron, Joel ;

Murayama, Emi ;

Vignal, Alain ;

Morisson, Mireille ;

McKee, Marc D. ;

Rehault, Sophie ;

Labas, Valerie ;

Belghazi, Maya ;

Vidal, Mary-Laure ;

Nys, Yves ;

Hincke, Maxwell T. .

JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (08) :5273-5286

[9] Cloning and characterization of the homolog of mammalian lipopolysaccharide-binding protein and bactericidal permeability-increasing protein in rainbow trout Oncorhynchus mykiss [J].

Inagawa, H ;

Honda, T ;

Kohchi, C ;

Nishizawa, T ;

Yoshiura, Y ;

Nakanishi, T ;

Yokomizo, Y ;

Soma, GI .

JOURNAL OF IMMUNOLOGY, 2002, 168 (11) :5638-5644

[10] VOMEROMODULIN, A PUTATIVE PHEROMONE TRANSPORTER - CLONING, CHARACTERIZATION, AND CELLULAR-LOCALIZATION OF A NOVEL GLYCOPROTEIN OF LATERAL NASAL GLAND [J].

KHEWGOODALL, Y ;

GRILLO, M ;

GETCHELL, ML ;

DANHO, W ;

GETCHELL, TV ;

MARGOLIS, FL .

FASEB JOURNAL, 1991, 5 (14) :2976-2982

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