Novel characterization of the folding of proteins

被引:9
作者
Liu, Liwei [1 ]
Wang, Tianming [1 ]
机构
[1] Dalian Univ Technol, Dept Appl Math, Dalian 116024, Peoples R China
关键词
protein folding; partial ordering; Hasse matrix; similarity; 3-step path conformation; SEQUENCES;
D O I
10.1002/qua.21341
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In this paper, we consider a characterization of the folding of 3D model proteins. In this characterization, we describe the different kinds of 3-step path conformation, then construct an augmented Hasse matrix which reflects some properties of the protein folding. This method can characterize the folding degree of 3D model proteins and evaluate the similarity/ diversity of these five model proteins. (c) 2007 Wiley Periodicals, Inc.
引用
收藏
页码:1970 / 1974
页数:5
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