Severity Detection for the Coronavirus Disease 2019 (COVID-19) Patients Using a Machine Learning Model Based on the Blood and Urine Tests

被引:72
作者
Yao, Haochen [1 ]
Zhang, Nan [2 ]
Zhang, Ruochi [3 ,4 ]
Duan, Meiyu [3 ,4 ]
Xie, Tianqi [5 ]
Pan, Jiahui [1 ]
Peng, Ejun [6 ]
Huang, Juanjuan [1 ]
Zhang, Yingli [2 ]
Xu, Xiaoming [2 ]
Xu, Hong [2 ]
Zhou, Fengfeng [3 ,4 ]
Wang, Guoqing [1 ]
机构
[1] Jilin Univ, Dept Pathogenobiol, Coll Basic Med Sci, Key Lab Zoonosis,Chinese Minist Educ, Changchun, Peoples R China
[2] Jilin Univ, First Hosp Jilin Univ, Changchun, Peoples R China
[3] Jilin Univ, Coll Software, BioKnow Hlth Informat Lab, Minist Educ, Changchun, Peoples R China
[4] Jilin Univ, Key Lab Symbol Computat & Knowledge Engn, Minist Educ, Changchun, Peoples R China
[5] Univ Pittsburgh, Sch Comp & Informat, Pittsburgh, PA USA
[6] Huazhong Univ Sci & Technol, Tongji Hosp, Tongji Med Coll, Wuhan, Peoples R China
基金
中国国家自然科学基金;
关键词
severity detection; COVID-19; model; blood and urine tests; biomarkers; PNEUMONIA; IDENTIFICATION; DIAGNOSIS; WUHAN;
D O I
10.3389/fcell.2020.00683
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
The recent outbreak of the coronavirus disease-2019 (COVID-19) caused serious challenges to the human society in China and across the world. COVID-19 induced pneumonia in human hosts and carried a highly inter-person contagiousness. The COVID-19 patients may carry severe symptoms, and some of them may even die of major organ failures. This study utilized the machine learning algorithms to build the COVID-19 severeness detection model. Support vector machine (SVM) demonstrated a promising detection accuracy after 32 features were detected to be significantly associated with the COVID-19 severeness. These 32 features were further screened for inter-feature redundancies. The final SVM model was trained using 28 features and achieved the overall accuracy 0.8148. This work may facilitate the risk estimation of whether the COVID-19 patients would develop the severe symptoms. The 28 COVID-19 severeness associated biomarkers may also be investigated for their underlining mechanisms how they were involved in the COVID-19 infections.
引用
收藏
页数:10
相关论文
共 57 条
[41]   Clinical Characteristics of 138 Hospitalized Patients With 2019 Novel Coronavirus-Infected Pneumonia in Wuhan, China [J].
Wang, Dawei ;
Hu, Bo ;
Hu, Chang ;
Zhu, Fangfang ;
Liu, Xing ;
Zhang, Jing ;
Wang, Binbin ;
Xiang, Hui ;
Cheng, Zhenshun ;
Xiong, Yong ;
Zhao, Yan ;
Li, Yirong ;
Wang, Xinghuan ;
Peng, Zhiyong .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2020, 323 (11) :1061-1069
[42]  
Wang Xian-Guang, 2020, NATURE, V579, P270, DOI DOI 10.1038/s41586-020-2012-7
[43]   Genome Composition and Divergence of the Novel Coronavirus (2019-nCoV) Originating in China [J].
Wu, Aiping ;
Peng, Yousong ;
Huang, Baoying ;
Ding, Xiao ;
Wang, Xianyue ;
Niu, Peihua ;
Meng, Jing ;
Zhu, Zhaozhong ;
Zhang, Zheng ;
Wang, Jiangyuan ;
Sheng, Jie ;
Quan, Lijun ;
Xia, Zanxian ;
Tan, Wenjie ;
Cheng, Genhong ;
Jiang, Taijiao .
CELL HOST & MICROBE, 2020, 27 (03) :325-328
[44]   ATBdiscrimination: An in Silico Tool for Identification of Active Tuberculosis Disease Based on Routine Blood Test and T-SPOT.TB Detection Results [J].
Wu, Jiangpeng ;
Bai, Jun ;
Wang, Wei ;
Xi, Lili ;
Zhang, Pengyi ;
Lan, Jingfeng ;
Zhang, Liansheng ;
Li, Shuyan .
JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2019, 59 (11) :4561-4568
[45]   Chest CT for Typical Coronavirus Disease 2019 (COVID-19) Pneumonia: Relationship to Negative RT-PCR Testing [J].
Xie, Xingzhi ;
Zhong, Zheng ;
Zhao, Wei ;
Zheng, Chao ;
Wang, Fei ;
Liu, Jun .
RADIOLOGY, 2020, 296 (02) :E41-E45
[46]   Covert COVID-19 and false-positive dengue serology in Singapore [J].
Yan, Gabriel ;
Lee, Chun Kiat ;
Lam, Lawrence T. M. ;
Yan, Benedict ;
Chua, Ying Xian ;
Lim, Anita Y. N. ;
Phang, Kee Fong ;
Sen Kew, Guan ;
Teng, Hazel ;
Ngai, Chin Hong ;
Lin, Li ;
Foo, Rui Min ;
Pada, Surinder ;
Ng, Lee Ching ;
Tambyah, Paul Anantharajah .
LANCET INFECTIOUS DISEASES, 2020, 20 (05) :536-536
[47]   Selection of features for patient-independent detection of seizure events using scalp EEG signals [J].
Yang, Shuhan ;
Li, Bo ;
Zhang, Yinda ;
Duan, Meiyu ;
Liu, Shuai ;
Zhang, Yexian ;
Feng, Xin ;
Tan, Renbo ;
Huang, Lan ;
Zhou, Fengfeng .
COMPUTERS IN BIOLOGY AND MEDICINE, 2020, 119
[48]   Clinical course and outcomes of critically ill patients with SARS-CoV-2 pneumonia in Wuhan, China: a single-centered, retrospective, observational study [J].
Yang, Xiaobo ;
Yu, Yuan ;
Xu, Jiqian ;
Shu, Huaqing ;
Xia, Jia'an ;
Liu, Hong ;
Wu, Yongran ;
Zhang, Lu ;
Yu, Zhui ;
Fang, Minghao ;
Yu, Ting ;
Wang, Yaxin ;
Pan, Shangwen ;
Zou, Xiaojing ;
Yuan, Shiying ;
Shang, You .
LANCET RESPIRATORY MEDICINE, 2020, 8 (05) :475-481
[49]  
YOUDEN WJ, 1950, BIOMETRICS, V6, P172, DOI 10.1002/1097-0142(1950)3:1<32::AID-CNCR2820030106>3.0.CO
[50]  
2-3