At the Intersection of Major and Minor Spliceosomes: Crosstalk Mechanisms and Their Impact on Gene Expression

被引:25
作者
Akinyi, Maureen V. [1 ]
Frilander, Mikko J. [1 ]
机构
[1] Univ Helsinki, Inst Biotechnol, Helsinki Inst Life Sci, Helsinki, Finland
关键词
RNA processing; mRNA splicing; minor spliceosome; major spliceosome; exon definition; cryptic splicing; minor spliceosome disease; PRE-MESSENGER-RNA; SMALL NUCLEAR RIBONUCLEOPROTEIN; ALTERNATIVE SPLICING REGULATION; EXON DEFINITION INTERACTIONS; U1-70K SNRNP PROTEIN; NEGATIVE REGULATOR; U12-TYPE INTRONS; U11; SNRNP; AT-AC; SR PROTEINS;
D O I
10.3389/fgene.2021.700744
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Many eukaryotic species contain two separate molecular machineries for removing non-coding intron sequences from pre-mRNA molecules. The majority of introns (more than 99.5% in humans) are recognized and excised by the major spliceosome, which utilizes relatively poorly conserved sequence elements at the 5' and 3' ends of the intron that are used for intron recognition and in subsequent catalysis. In contrast, the minor spliceosome targets a rare group of introns (approximately 0.5% in humans) with highly conserved sequences at the 5' and 3' ends of the intron. Minor introns coexist in the same genes with major introns and while the two intron types are spliced by separate spliceosomes, the two splicing machineries can interact with one another to shape mRNA processing events in genes containing minor introns. Here, we review known cooperative and competitive interactions between the two spliceosomes and discuss the mechanistic basis of the spliceosome crosstalk, its regulatory significance, and impact on spliceosome diseases.
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页数:10
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共 80 条
[1]   Defective minor spliceosome mRNA processing results in isolated familial growth hormone deficiency [J].
Argente, Jesus ;
Flores, Raquel ;
Gutierrez-Arumi, Armand ;
Verma, Bhupendra ;
Martos-Moreno, Gabriel A. ;
Cusco, Ivon ;
Oghabian, Ali ;
Chowen, Julie A. ;
Frilander, Mikko J. ;
Perez-Jurado, Luis A. ' .
EMBO MOLECULAR MEDICINE, 2014, 6 (03) :299-306
[2]   U12 type introns were lost at multiple occasions during evolution [J].
Bartschat, Sebastian ;
Samuelsson, Tore .
BMC GENOMICS, 2010, 11
[3]   An Integrated Model of Minor Intron Emergence and Conservation [J].
Baumgartner, Marybeth ;
Drake, Kyle ;
Kanadia, Rahul N. .
FRONTIERS IN GENETICS, 2019, 10
[4]   EXON RECOGNITION IN VERTEBRATE SPLICING [J].
BERGET, SM .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1995, 270 (06) :2411-2414
[5]   Drosophila hnRNP A1 homologs Hrp36/Hrp38 enhance U2-type versus U12-type splicing to regulate alternative splicing of the prospero twintron [J].
Borah, Sumit ;
Wong, Anthony C. ;
Steitz, Joan A. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (08) :2577-2582
[6]   Aberrant 5′ splice sites in human disease genes:: mutation pattern, nucleotide structure and comparison of computational tools that predict their utilization [J].
Buratti, Emanuele ;
Chivers, Martin ;
Kralovicova, Jana ;
Romano, Maurizio ;
Baralle, Marco ;
Krainer, Adrian R. ;
Vorechovsky, Igor .
NUCLEIC ACIDS RESEARCH, 2007, 35 (13) :4250-4263
[7]   Evolutionary fates and origins of U12-type introns [J].
Burge, CB ;
Padgett, RA ;
Sharp, PA .
MOLECULAR CELL, 1998, 2 (06) :773-785
[8]   Alternative splicing and bioinformatic analysis of human U12-type introns [J].
Chang, Wen-Cheng ;
Chen, Yung-Chia ;
Lee, Kuo-Ming ;
Tarn, Woan-Yuh .
NUCLEIC ACIDS RESEARCH, 2007, 35 (06) :1833-1841
[9]   Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches [J].
Chen, Mo ;
Manley, James L. .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2009, 10 (11) :741-754
[10]   Interaction between the RNA binding domains of Ser-Arg splicing factor 1 and U1-70K snRNP protein determines early spliceosome assembly [J].
Cho, Suhyung ;
Hoang, Amy ;
Sinha, Rahul ;
Zhong, Xiang-Yang ;
Fu, Xiang-Dong ;
Krainer, Adrian R. ;
Ghosh, Gourisankar .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (20) :8233-8238