Promoter-bound METTL3 maintains myeloid leukaemia by m6A-dependent translation control

被引:895
作者
Barbieri, Isaia [1 ,2 ]
Tzelepis, Konstantinos [3 ]
Pandolfini, Luca [1 ,2 ]
Shi, Junwei [4 ,8 ]
Millan-Zambrano, Gonzalo [1 ,2 ]
Robson, Samuel C. [1 ,2 ,9 ]
Aspris, Demetrios [3 ]
Migliori, Valentina [1 ,2 ]
Bannister, Andrew J. [1 ,2 ]
Han, Namshik [1 ,2 ]
De Braekeleer, Etienne [3 ]
Ponstingl, Hannes [3 ]
Hendrick, Alan [5 ]
Vakoc, Christopher R. [4 ]
Vassiliou, George S. [3 ,6 ,7 ]
Kouzarides, Tony [1 ,2 ]
机构
[1] Univ Cambridge, Gurdon Inst, Tennis Court Rd, Cambridge CB2 1QN, England
[2] Univ Cambridge, Dept Pathol, Tennis Court Rd, Cambridge CB2 1QN, England
[3] Wellcome Trust Sanger Inst, Haematol Canc Genet, Cambridge CB10 1SA, England
[4] Cold Spring Harbor Lab, 1 Bungtown Rd, Cold Spring Harbor, NY 11724 USA
[5] Storm Therapeut Ltd, Moneta Bldg B280,Babraham Res Campus, Cambridge CB22 3AT, England
[6] Univ Cambridge, Wellcome Trust MRC Cambridge Stem Cell Inst, Cambridge CB2 0XY, England
[7] Cambridge Univ Hosp NHS Trust, Dept Haematol, Cambridge CB2 0QQ, England
[8] Univ Penn, Perelman Sch Med, Abramson Family Canc Res Inst, Dept Canc Biol, 421 Curie Blvd, Philadelphia, PA 19104 USA
[9] Univ Portsmouth, Sch Pharm & Biomed Sci, St Michaels Bldg,White Swan Rd, Portsmouth, Hants, England
基金
英国惠康基金; 欧洲研究理事会;
关键词
MESSENGER-RNA TRANSLATION; TRANSCRIPTION FACTORS; N-6-METHYLADENOSINE; BINDING; METHYLATION; INHIBITION; ELEMENTS; TARGETS; MURINE; ATLAS;
D O I
10.1038/nature24678
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
N-6-methyladenosine (m(6)A) is an abundant internal RNA modification in both coding(1) and non-coding RNAs2,3 that is catalysed by the METTL3-METTL14 methyltransferase complex4. However, the specific role of these enzymes in cancer is still largely unknown. Here we define a pathway that is specific for METTL3 and is implicated in the maintenance of a leukaemic state. We identify METTL3 as an essential gene for growth of acute myeloid leukaemia cells in two distinct genetic screens. Downregulation of METTL3 results in cell cycle arrest, differentiation of leukaemic cells and failure to establish leukaemia in immunodeficient mice. We show that METTL3, independently of METTL14, associates with chromatin and localizes to the transcriptional start sites of active genes. The vast majority of these genes have the CAATT-box binding protein CEBPZ present at the transcriptional start site(5), and this is required for recruitment of METTL3 to chromatin. Promoterbound METTL3 induces m(6)A modification within the coding region of the associated mRNA transcript, and enhances its translation by relieving ribosome stalling. We show that genes regulated by METTL3 in this way are necessary for acute myeloid leukaemia. Together, these data define METTL3 as a regulator of a chromatinbased pathway that is necessary for maintenance of the leukaemic state and identify this enzyme as a potential therapeutic target for acute myeloid leukaemia.
引用
收藏
页码:126 / +
页数:24
相关论文
共 52 条
[1]   N6-methyladenosine marks primary microRNAs for processing [J].
Alarcon, Claudio R. ;
Lee, Hyeseung ;
Goodarzi, Hani ;
Halberg, Nils ;
Tavazoie, Sohail F. .
NATURE, 2015, 519 (7544) :482-+
[2]   MEME SUITE: tools for motif discovery and searching [J].
Bailey, Timothy L. ;
Boden, Mikael ;
Buske, Fabian A. ;
Frith, Martin ;
Grant, Charles E. ;
Clementi, Luca ;
Ren, Jingyuan ;
Li, Wilfred W. ;
Noble, William S. .
NUCLEIC ACIDS RESEARCH, 2009, 37 :W202-W208
[3]   The mRNA-Bound Proteome and Its Global Occupancy Profile on Protein-Coding Transcripts [J].
Baltz, Alexander G. ;
Munschauer, Mathias ;
Schwanhaeusser, Bjoern ;
Vasile, Alexandra ;
Murakawa, Yasuhiro ;
Schueler, Markus ;
Youngs, Noah ;
Penfold-Brown, Duncan ;
Drew, Kevin ;
Milek, Miha ;
Wyler, Emanuel ;
Bonneau, Richard ;
Selbach, Matthias ;
Dieterich, Christoph ;
Landthaler, Markus .
MOLECULAR CELL, 2012, 46 (05) :674-690
[4]   m6A RNA Modification Controls Cell Fate Transition in Mammalian Embryonic Stem Cells [J].
Batista, Pedro J. ;
Molinie, Benoit ;
Wang, Jinkai ;
Qu, Kun ;
Zhang, Jiajing ;
Li, Lingjie ;
Bouley, Donna M. ;
Lujan, Ernesto ;
Haddad, Bahareh ;
Daneshvar, Kaveh ;
Carter, Ava C. ;
Flynn, Ryan A. ;
Zhou, Chan ;
Lim, Kok-Seong ;
Dedon, Peter ;
Wernig, Marius ;
Mullen, Alan C. ;
Xing, Yi ;
Giallourakis, Cosmas C. ;
Chang, Howard Y. .
CELL STEM CELL, 2014, 15 (06) :707-719
[5]   Easy quantitative assessment of genome editing by sequence trace decomposition [J].
Brinkman, Eva K. ;
Chen, Tao ;
Amendola, Mario ;
van Steensel, Bas .
NUCLEIC ACIDS RESEARCH, 2014, 42 (22)
[6]   Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins [J].
Castello, Alfredo ;
Fischer, Bernd ;
Eichelbaum, Katrin ;
Horos, Rastislav ;
Beckmann, Benedikt M. ;
Strein, Claudia ;
Davey, Norman E. ;
Humphreys, David T. ;
Preiss, Thomas ;
Steinmetz, Lars M. ;
Krijgsveld, Jeroen ;
Hentze, Matthias W. .
CELL, 2012, 149 (06) :1393-1406
[7]   VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R [J].
Chen, Hanbo ;
Boutros, Paul C. .
BMC BIOINFORMATICS, 2011, 12
[8]  
Cui X., 2015, IEEE ACM T COMPUT BI
[9]   Inhibition of BET recruitment to chromatin as an effective treatment for MLL-fusion leukaemia [J].
Dawson, Mark A. ;
Prinjha, Rab K. ;
Dittmann, Antje ;
Giotopoulos, George ;
Bantscheff, Marcus ;
Chan, Wai-In ;
Robson, Samuel C. ;
Chung, Chun-wa ;
Hopf, Carsten ;
Savitski, Mikhail M. ;
Huthmacher, Carola ;
Gudgin, Emma ;
Lugo, Dave ;
Beinke, Soren ;
Chapman, Trevor D. ;
Roberts, Emma J. ;
Soden, Peter E. ;
Auger, Kurt R. ;
Mirguet, Olivier ;
Doehner, Konstanze ;
Delwel, Ruud ;
Burnett, Alan K. ;
Jeffrey, Phillip ;
Drewes, Gerard ;
Lee, Kevin ;
Huntly, Brian J. P. ;
Kouzarides, Tony .
NATURE, 2011, 478 (7370) :529-533
[10]   VEGFR1-activity-independent metastasis formation [J].
Dawson, Michelle R. ;
Duda, Dan G. ;
Fukumura, Dai ;
Jain, Rakesh K. .
NATURE, 2009, 461 (7262) :E4-E5