Exploring QSAR modeling of toxicity of chemicals on earthworm

被引:31
作者
Ghosh, Sulekha [1 ]
Ojha, Probir Kumar [1 ]
Carnesecchi, Edoardo [2 ,3 ]
Lombardo, Anna [3 ]
Roy, Kunal [1 ]
Benfenati, Emilio [3 ]
机构
[1] Jadavpur Univ, Dept Pharmaceut Technol, Drug Theoret & Cheminformat Lab, Kolkata 700032, India
[2] Univ Utrecht, Inst Risk Assessment Sci, POB 80177, NL-3508 TD Utrecht, Netherlands
[3] Ist Ric Farmacol Mario Negri IRCCS, Dept Environm Hlth, Lab Environm Chem & Toxicol, Via Mario Negri 2, I-20156 Milan, Italy
关键词
Argoecosystem; PLS; Earthworm; Toxicity; QSAR; EISENIA-FOETIDA; APORRECTODEA-CALIGINOSA; BIOMARKER RESPONSES; CHLORAGOGEN CELLS; VALIDATION; CHLOROPHENOLS; CHLORPYRIFOS; PESTICIDE; EXPOSURE; NEONICOTINOIDS;
D O I
10.1016/j.ecoenv.2019.110067
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Earthworm provides sustainability towards the agroecosystem which can be degraded day by day by the extensive use of pesticides (e.g., fungicides, insecticides and herbicides). The present study attempts to develop a predictive quantitative structure-activity relationship (QSAR) model for toxicity of pesticides to earthworm in order to give a suitable guidance for designing new analogues with lower toxicity by exploring the important chemical features which are required to develop safer alternatives. The QSAR model was developed by using the negative logarithm of lethal concentration (pLC(50)) values of pesticides towards earthworm. We have used various 2D descriptors along with extended topochemical atom (ETA) indices as independent variables for the development of the model. The developed partial least squares (PLS) model was subjected to statistical validation tests proving that the model is statistically reliable and robust (R-2 = 0.765, Q(2) = 0.614, Q(F1)(2) = 0.734, Q(F2)(2) = 0.713). The contributing descriptors in the model suggested that the pesticides may affect the earthworm nucleic acid through various physicochemical interactions including hydrophobicity, hydrogen bonding, electron donor acceptor complex formation, pi-pi stacking interaction and charge transfer complex formation.
引用
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页数:9
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