Complete chloroplast genome sequence and phylogenetic analysis of Ilex viridis Champ. ex Benth

被引：1
|
作者：
Shan, Zhenyu [1 ]
Zhou, Biyao [1 ]
Li, Yao [1 ,2 ]
Liu, Daosen [3 ]
Li, Wei [1 ]
Ma, Julin [1 ]
Su, Tao [1 ,2 ]
机构：
[1] Nanjing Forestry Univ, Coll Biol & Environm, Coinnovat Ctr Sustainable Forestry Southern China, Nanjing, Peoples R China
[2] Nanjing Forestry Univ, Key Lab State Forestry Adm Subtrop Forest Biodive, Nanjing 210037, Peoples R China
[3] Qiqihar Univ, Inst Commun & Elect Engn, Qiqihar, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 01期
基金：
中国国家自然科学基金;
关键词：
Ilex viridis; complete chloroplast genome; phylogenetic analysis; PERFORMANCE;
D O I：
10.1080/23802359.2020.1719913
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
Ilex viridis Champ. ex Benth. is domestic to southern China. In the present work, the complete chloroplast (cp) genome sequence of Ilex viridis was assembled and characterized by high-throughput sequencing analyses. The chloroplast genome was 157,701 bp in length, consisting of large single-copy (LSC) and small single-copy (SSC) regions of 87,177 bp and 18,394 bp, respectively, which were separated by a pair of 26,065 bp inverted repeat (IR) regions. The genome was predicted to contain 134 genes, including 89 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the genome is 37.7%. The phylogenetic tree reconstructed using 13 chloroplast genomes reveals that I. viridis is mostly related to Ilex szechwanensis.
引用
收藏
页码：914 / 915
页数：2
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