Structural Basis for Regulation of RNA-Binding Proteins by Phosphorylation

被引:43
作者
Thapar, Roopa [1 ]
机构
[1] Rice Univ, BioSci Rice, Biochem & Cell Biol, Houston, TX 77251 USA
基金
美国国家卫生研究院;
关键词
HISTONE MESSENGER-RNA; CELL-CYCLE REGULATION; SPLICE-SITE RECOGNITION; STEM-LOOP; UNFOLDED-PROTEIN; SR PROTEIN; TRANSLATION INITIATION; NUCLEAR IMPORT; INTRACELLULAR-LOCALIZATION; GLYCOGEN-PHOSPHORYLASE;
D O I
10.1021/cb500860x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Ribonucleoprotein complexes involved in pre-mRNA splicing and mRNA decay are often regulated by phosphorylation of RNA-binding proteins. Cells use phosphorylation-dependent signaling pathways to turn on and off gene expression. Not much is known about how phosphorylation-dependent signals transmitted by exogenous factors or cell cycle checkpoints regulate RNA-mediated gene expression at the atomic level. Several human diseases are linked to an altered phosphorylation state of an RNA binding protein. Understanding the structural response to the phosphorylation signal and its effect on ribonucleoprotein assembly provides mechanistic understanding, as well as new information for the design of novel drugs. In this review, I highlight recent structural studies that reveal the mechanisms by which phosphorylation can regulate protein-protein and protein-RNA interactions in ribonucleoprotein complexes.
引用
收藏
页码:652 / 666
页数:15
相关论文
共 126 条
[101]   Regulation of HIV-1 Alternative RNA Splicing and Its Role in Virus Replication [J].
Stoltzfus, C. Martin .
ADVANCES IN VIRUS RESEARCH, VOL 74, 2009, 74 :1-40
[102]   Knockdown of SLBP results in nuclear retention of histone mRNA [J].
Sullivan, Kelly D. ;
Mullen, Thomas E. ;
Marzluff, William F. ;
Wagner, Eric J. .
RNA, 2009, 15 (03) :459-472
[103]   Structure of Histone mRNA Stem-Loop, Human Stem-Loop Binding Protein, and 3′hExo Ternary Complex [J].
Tan, Dazhi ;
Marzluff, William F. ;
Dominski, Zbigniew ;
Tong, Liang .
SCIENCE, 2013, 339 (6117) :318-321
[104]   Biogenesis of 2-agmatinylcytidine catalyzed by the dual protein and RNA kinase TiaS [J].
Terasaka, Naohiro ;
Kimura, Satoshi ;
Osawa, Takuo ;
Numata, Tomoyuki ;
Suzuki, Tsutomu .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2011, 18 (11) :1268-U116
[105]   Electrostatic contribution of serine phosphorylation to the Drosophila SLBP-histone mRNA complex [J].
Thapar, R ;
Marzluff, WF ;
Redinbo, MR .
BIOCHEMISTRY, 2004, 43 (29) :9401-9412
[106]   Contribution of protein phosphorylation to binding-induced folding of the SLBP-histone mRNA complex probed by phosphorus-31 NMR [J].
Thapar, Roopa .
FEBS OPEN BIO, 2014, 4 :853-857
[107]   Signaling pathways that control mRNA turnover [J].
Thapar, Roopa ;
Denmon, Andria P. .
CELLULAR SIGNALLING, 2013, 25 (08) :1699-1710
[108]   Structural and functional analysis of RNA and TAP binding to SF2/ASF [J].
Tintaru, Aura M. ;
Hautbergue, Guillaume M. ;
Hounslow, Andrea M. ;
Hung, Ming-Lung ;
Lian, Lu-Yun ;
Craven, C. Jeremy ;
Wilson, Stuart A. .
EMBO REPORTS, 2007, 8 (08) :756-762
[109]   Mass spectrometric and kinetic analysis of ASF/SF2 phosphorylation by SRPK1 and Clk/Sty [J].
Velazquez-Dones, A ;
Hagopian, JC ;
Ma, CT ;
Zhong, XY ;
Zhou, HL ;
Ghosh, G ;
Fu, XD ;
Adams, JA .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (50) :41761-41768
[110]   The Spliceosome: Design Principles of a Dynamic RNP Machine [J].
Wahl, Markus C. ;
Will, Cindy L. ;
Luehrmann, Reinhard .
CELL, 2009, 136 (04) :701-718