The informational concept of searching for periodicity in symbol sequences

被引：7

作者：

Korotkov, EV ^{[1
]}

Korotkova, MA

Frenkel, FE

Kudryashov, NA

机构：

[1] Russian Acad Sci, Ctr Bioengn, Moscow 117312, Russia

[2] Moscow Engn & Phys Inst, Moscow 115409, Russia

来源：

MOLECULAR BIOLOGY | 2003年 / 37卷 / 03期

关键词：

autocorrelation function; hidden periodicity; symbol sequences; structure of sequences; genes and proteins;

D O I：

10.1023/A:1024231109360

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

A method of informational decomposition has been developed, allowing one to reveal hidden periodicity in any symbol sequence. The informational decomposition is calculated without conversion of a symbol sequence into a numerical one, which facilitates finding periodicities in a symbol sequence. The method permits introducing an analog of the autocorrelation function of a symbol sequence. The method developed by us has been applied to reveal hidden periodicities in nucleotide and amino acid sequences, as well as in different poetical texts. Hidden periodicity has been detected in various genes, testifying to their quantum structure. The functional and structural role of hidden periodicity is discussed.

引用

页码：372 / 386

页数：15

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