Sphingomonas rosea sp nov and Sphingomonas swuensis sp nov., Rosy Colored β-Glucosidase-Producing Bacteria Isolated from Soil

被引:12
作者
Srinivasan, Sathiyaraj [1 ]
Lee, Jae-Jin [1 ]
Kim, Myung Kyum [1 ]
机构
[1] Seoul Womens Univ, Coll Nat Sci, Dept Bio & Environm Technol, Seoul 139774, South Korea
关键词
taxonomy; 16S rRNA gene; Sphingomonas rosea; Sphingomonas swuensis; GENUS SPHINGOMONAS; FAMILY SPHINGOMONADACEAE; DEOXYRIBONUCLEIC-ACID; EMENDED DESCRIPTION; SPHINGOPYXIS; NOVOSPHINGOBIUM; SPHINGOBIUM; GENERA;
D O I
10.1007/s12275-011-1017-1
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Two strains PB196(T) and PB62(T) of Gram-negative, non-motile, and non-spore-forming bacteria, were isolated from soil in South Korea and characterized to determine their taxonomic positions. 16S rRNA gene sequence analysis showed that the two strains belonged to the genus Sphingomonas. The highest degree of sequence similarity of strain PB196(T) was found with PB62(T) (98.9%), Sphingomonas humi PB323(T) (98.9%), Sphingomonas kaistensis PB56(T) (98.2%), and Sphingomonas astaxanthinifaciens TDMA-17(T) (98.0%). The highest degree of sequence similarity of strain PB62(T) was found with Sphingomonas humi PB323(T) (98.8%), Sphingomonas astaxanthinifaciens TDMA-17(T) (98.2%), and Sphingomonas kaistensis PB56(T) (98.1%). Chemotaxonomic data revealed that they possessed ubiquinone-10 (Q-10) as common in the genus Sphingomonas, that the predominant fatty acids were summed feature 7 (C-18:1 omega 7c/omega 9t/omega 12t), summed feature 4 (C-16:1 omega 7c/C-15:0 iso 2OH), C-16:0, and C-17:1 omega 6c, and that they contained sphingoglycolipid, phosphatidylglycerol (PG), and phosphatidylethanolamine (PE) in common, but they showed difference for diphosphatidylglycerol (DPG). Based on these data, PB196(T) (=KCTC 12339(T)=JCM 16604(T)) and PB62(T) (=KCTC 12336(T)=JCM 16605(T)=KEMB 9004-005(T)) should he classified as type strains of two novel species, for which the names Sphingomonas rosea sp. nov. and Sphingomonas swuensis sp. nov. are proposed, respectively.
引用
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页码:610 / 616
页数:7
相关论文
共 37 条
[1]  
AN H, INT J SYST IN PRESS
[2]   Sphingomonas astaxanthinifaciens sp nov.,: a novel astaxanthin-producing bacterium of the family Sphingomonadaceae isolated from Misasa, Tottori, Japan [J].
Asker, Dalal ;
Beppu, Teruhiko ;
Ueda, Kenji .
FEMS MICROBIOLOGY LETTERS, 2007, 273 (02) :140-148
[3]   NON-STAINING (KOH) METHOD FOR DETERMINATION OF GRAM REACTIONS OF MARINE-BACTERIA [J].
BUCK, JD .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1982, 44 (04) :992-993
[4]   Chemotaxonomic characterisation of Sphingomonas [J].
Busse, HJ ;
Kämpfer, P ;
Denner, EBM .
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY, 1999, 23 (4-5) :242-251
[5]   Sphingomonas aurantiaca sp nov., Sphingomonas aerolata sp nov and Sphingomonas faeni sp nov., air- and dustborne and Antarctic, orange-pigmented, psychrotolerant bacteria, and emended description of the genus Sphingomonas [J].
Busse, HJ ;
Denner, EBM ;
Buczolits, S ;
Salkinoja-Salonen, M ;
Bennasar, A ;
Kämpfer, P .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2003, 53 :1253-1260
[6]   Sphingomonas ginsenosidimutans sp nov., with Ginsenoside Converting Activity [J].
Choi, Tae-Eun ;
Liu, Qing-Mei ;
Yang, Jung-Eun ;
Sun, Siyi ;
Kim, Se-Young ;
Yi, Tae-Hoo ;
Im, Wan-Taek .
JOURNAL OF MICROBIOLOGY, 2010, 48 (06) :760-766
[7]   DISTRIBUTION OF ISOPRENOID QUINONE STRUCTURAL TYPES IN BACTERIA AND THEIR TAXONOMIC IMPLICATIONS [J].
COLLINS, MD ;
JONES, D .
MICROBIOLOGICAL REVIEWS, 1981, 45 (02) :316-354
[8]   Sphingobacterium bambusae sp nov., Isolated from Soil of Bamboo Plantation [J].
Duan, Shengwen ;
Liu, Zhengchu ;
Feng, Xiangyuan ;
Zheng, Ke ;
Cheng, Lifeng .
JOURNAL OF MICROBIOLOGY, 2009, 47 (06) :693-698
[9]   FLUOROMETRIC DEOXYRIBONUCLEIC ACID DEOXYRIBONUCLEIC ACID HYBRIDIZATION IN MICRODILUTION WELLS AS AN ALTERNATIVE TO MEMBRANE-FILTER HYBRIDIZATION IN WHICH RADIOISOTOPES ARE USED TO DETERMINE GENETIC RELATEDNESS AMONG BACTERIAL STRAINS [J].
EZAKI, T ;
HASHIMOTO, Y ;
YABUUCHI, E .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (03) :224-229
[10]  
FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x