The sudden mass passenger after social events can make huge impact on the normal operation of rail transit station. This paper mainly studies on the influence of mass passenger flow after special events on the passenger organization of the station nearby. Based on the investigation of station facilities and passenger flow data, this paper compares and analyzes the characteristics of passenger flow and measures of passenger organization on weekdays and the activity days. The station facilities and pedestrian movement simulation models are built using Anylogic. According to the congestion level and service level standard, this paper describes the influence of mass passenger flow after special events on the subway station. Then the optimized measures on operational organization are put forward to simulate and compared with simulation platform. Considering the different characteristics in different activities, we grade the impact of the events with different attendance on the subway stations from the aspect of congestion. Finally the optimized joint measures on operational organization for different impact levels are put forward by constructing an effective communication management between the venues and the subway stations.