Structural Biology-Inspired Discovery of Novel KRAS-PDEδ Inhibitors

被引:26
作者
Jiang, Yan [1 ]
Zhuang, Chunlin [1 ]
Chen, Long [1 ]
Lu, Junjie [1 ]
Dong, Guoqiang [1 ]
Miao, Zhenyuan [1 ]
Zhang, Wannian [1 ]
Li, Jian [2 ]
Sheng, Chunquan [1 ]
机构
[1] Second Mil Med Univ, Sch Pharm, Shanghai 200433, Peoples R China
[2] East China Univ Sci & Technol, Sch Pharm, Shanghai 200237, Peoples R China
基金
中国国家自然科学基金;
关键词
PROTEIN PRENYLATION; CANCER-THERAPY; RAS; TRANSPORT; MEMBRANE; SUBUNIT; GTPASES; BIND;
D O I
10.1021/acs.jmedchem.7b01243
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Structural biology is a powerful tool for investigating the stereospecific interactions between a protein and its ligand. Herein, an unprecedented chiral binding pattern was observed for inhibitors of KRAS-PDE delta interactions. Virtual screening and X-ray crystallography studies revealed that two enantiomers of a racemic inhibitor could bind at different sites. Fragment-based drug design was used to identify highly potent PDE delta inhibitors that can be used as promising lead compounds for target validation and antitumor drug development.
引用
收藏
页码:9400 / 9406
页数:7
相关论文
共 28 条
[1]   Targeting protein prenylation for cancer therapy [J].
Berndt, Norbert ;
Hamilton, Andrew D. ;
Sebti, Said M. .
NATURE REVIEWS CANCER, 2011, 11 (11) :775-791
[2]   Mirror-Image Packing Provides a Molecular Basis for the Nanomolar Equipotency of Enantiomers of an Experimental Herbicide [J].
Bisson, Claudine ;
Britton, K. Linda ;
Sedelnikova, Svetlana E. ;
Rodgers, H. Fiona ;
Eadsforth, Thomas C. ;
Viner, Russell C. ;
Hawkes, Tim R. ;
Baker, Patrick J. ;
Rice, David W. .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2016, 55 (43) :13485-13489
[3]   Targeting KRAS for diagnosis, prognosis, and treatment of pancreatic cancer: Hopes and realities [J].
Bournet, Barbara ;
Buscail, Camille ;
Muscari, Fabrice ;
Cordelier, Pierre ;
Buscail, Louis .
EUROPEAN JOURNAL OF CANCER, 2016, 54 :75-83
[4]   Lipidated Ras and Rab peptides and proteins - Synthesis, structure, and function [J].
Brunsveld, Luc ;
Kuhlmann, Juergen ;
Alexandrov, Kirill ;
Wittinghofer, Alfred ;
Goody, Roger S. ;
Waldmann, Herbert .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2006, 45 (40) :6622-6646
[5]   The GDI-like solubilizing factor PDEδ sustains the spatial organization and signalling of Ras family proteins [J].
Chandra, Anchal ;
Grecco, Hernan E. ;
Pisupati, Venkat ;
Perera, David ;
Cassidy, Liam ;
Skoulidis, Ferdinandos ;
Ismail, Shehab A. ;
Hedberg, Christian ;
Hanzal-Bayer, Michael ;
Venkitaraman, Ashok R. ;
Wittinghofer, Alfred ;
Bastiaens, Philippe I. H. .
NATURE CELL BIOLOGY, 2012, 14 (02) :148-158
[6]   Synthesis of the Rheb and K-Ras4B GTPases [J].
Chen, Yong-Xiang ;
Koch, Sebastian ;
Uhlenbrock, Katharina ;
Weise, Katrin ;
Das, Debapratim ;
Gremer, Lothar ;
Brunsveld, Luc ;
Wittinghofer, Alfred ;
Winter, Roland ;
Triola, Gemma ;
Waldmann, Herbert .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2010, 49 (35) :6090-6095
[7]   Ammonia-induced Na,K-ATPase/ouabain-mediated EGF receptor transactivation, MAPK/ERK and PI3K/AKT signaling and ROS formation cause astrocyte swelling [J].
Dai, Hongliang ;
Song, Dan ;
Xu, Junnan ;
Li, Baoman ;
Hertz, Leif ;
Peng, Liang .
NEUROCHEMISTRY INTERNATIONAL, 2013, 63 (06) :610-625
[8]   Targeting ras signalling pathways in cancer therapy [J].
Downward, J .
NATURE REVIEWS CANCER, 2003, 3 (01) :11-22
[9]   Therapeutic intervention based on protein prenylation and associated modifications [J].
Gelb, Michael H. ;
Brunsveld, Lucas ;
Hrycyna, Christine A. ;
Michaelis, Susan ;
Tamanoi, Fuyuhiko ;
Van Voorhis, Wesley C. ;
Waldmann, Herbert .
NATURE CHEMICAL BIOLOGY, 2006, 2 (10) :518-528
[10]  
Ismail SA, 2011, NAT CHEM BIOL, V7, P942, DOI [10.1038/NCHEMBIO.686, 10.1038/nchembio.686]