Origin and diversification of the plasminogen activation system among chordates

被引:32
作者
Chana-Munoz, Andres [1 ]
Jendroszek, Agnieszka [2 ,6 ]
Sonnichsen, Malene [2 ,6 ]
Wang, Tobias [3 ]
Ploug, Michael [4 ,5 ]
Jensen, Jan K. [2 ]
Andreasen, Peter A. [2 ]
Bendixen, Christian [1 ]
Panitz, Frank [1 ]
机构
[1] Aarhus Univ, Dept Mol Biol & Genet, DK-8830 Tjele, Denmark
[2] Aarhus Univ, Dept Mol Biol & Genet, DK-8000 Aarhus, Denmark
[3] Aarhus Univ, Inst Biosci Zoophysiol, DK-8000 Aarhus, Denmark
[4] Rigshosp, Finsen Lab, DK-2200 Copenhagen N, Denmark
[5] Univ Copenhagen, BRIC, DK-2200 Copenhagen, Denmark
[6] Aarhus Univ, Interdisciplinary Nanosci Ctr INANO MBG, DK-8000 Aarhus, Denmark
关键词
Plasminogen; Plasminogen activation system; Evolution; Phylogenetic analysis; Chordates; Transcriptome analysis; UROKINASE RECEPTOR; BLOOD-COAGULATION; CELLULAR RECEPTOR; CRYSTAL-STRUCTURE; PROTEASE NEXIN-1; INHIBITOR TYPE-1; DOMAIN-STRUCTURE; EVOLUTION; GENOME; BINDING;
D O I
10.1186/s12862-019-1353-z
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
BackgroundThe plasminogen (PLG) activation system is composed by a series of serine proteases, inhibitors and several binding proteins, which together control the temporal and spatial generation of the active serine protease plasmin. As this proteolytic system plays a central role in human physiology and pathophysiology it has been extensively studied in mammals. The serine proteases of this system are believed to originate from an ancestral gene by gene duplications followed by domain gains and deletions. However, the identification of ancestral forms in primitive chordates supporting these theories remains elusive. In addition, evolutionary studies of the non-proteolytic members of this system are scarce.ResultsOur phylogenetic analyses place lamprey PLG at the root of the vertebrate PLG-group, while lamprey PLG-related growth factors represent the ancestral forms of the jawed-vertebrate orthologues. Furthermore, we find that the earliest putative orthologue of the PLG activator group is the hyaluronan binding protein 2 (HABP2) gene found in lampreys. The prime plasminogen activators (tissue- and urokinase-type plasminogen activator, tPA and uPA) first occur in cartilaginous fish and phylogenetic analyses confirm that all orthologues identified compose monophyletic groups to their mammalian counterparts. Cartilaginous fishes exhibit the most ancient vitronectin of all vertebrates, while plasminogen activator inhibitor 1 (PAI-1) appears for the first time in cartilaginous fishes and is conserved in the rest of jawed vertebrate clades. PAI-2 appears for the first time in the common ancestor of reptiles and mammals, and represents the latest appearing plasminogen activator inhibitor. Finally, we noted that the urokinase-type plasminogen activator receptor (uPAR)and three-LU domain containing genes in generaloccurred later in evolution and was first detectable after coelacanths.ConclusionsThis study identifies several primitive orthologues of the mammalian plasminogen activation system. These ancestral forms provide clues to the origin and diversification of this enzyme system. Further, the discovery of several membershitherto unknown in mammalsprovide new perspectives on the evolution of this important enzyme system.
引用
收藏
页数:17
相关论文
共 105 条
[11]   Emerging role of serpinE2/protease nexin-1 in hemostasis and vascular biology [J].
Bouton, Marie-Christine ;
Boulaftali, Yacine ;
Richard, Benjamin ;
Arocas, Veronique ;
Michel, Jean-Baptiste ;
Jandrot-Perrus, Martine .
BLOOD, 2012, 119 (11) :2452-2457
[12]   Complete mitochondrial genome sequences of the South American and the Australian lungfish: Testing of the phylogenetic performance of mitochondrial data sets for phylogenetic problems in tetrapod relationships [J].
Brinkmann, H ;
Denk, A ;
Zitzler, J ;
Joss, JJ ;
Meyer, A .
JOURNAL OF MOLECULAR EVOLUTION, 2004, 59 (06) :834-848
[13]   trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses [J].
Capella-Gutierrez, Salvador ;
Silla-Martinez, Jose M. ;
Gabaldon, Toni .
BIOINFORMATICS, 2009, 25 (15) :1972-1973
[14]   Structure and function of the plasminogen/plasmin system [J].
Castellino, FJ ;
Ploplis, VA .
THROMBOSIS AND HAEMOSTASIS, 2005, 93 (04) :647-654
[15]   Multi-tissue RNA-seq and transcriptome characterisation of the spiny dogfish shark (Squalus acanthias) provides a molecular tool for biological research and reveals new genes involved in osmoregulation [J].
Chana-Munoz, Andres ;
Jendroszek, Agnieszka ;
Sonnichsen, Malene ;
Kristiansen, Rune ;
Jensen, Jan K. ;
Andreasen, Peter A. ;
Bendixen, Christian ;
Panitz, Frank .
PLOS ONE, 2017, 12 (08)
[16]   A Novel Serpin with Antithrombin-Like Activity in Branchiostoma japonicum: Implications for the Presence of a Primitive Coagulation System [J].
Chao, Yeqing ;
Fan, Chunxin ;
Liang, Yujun ;
Gao, Bei ;
Zhang, Shicui .
PLOS ONE, 2012, 7 (03)
[17]   A region in urokinase plasminogen receptor domain III controlling a functional association with α5β1 integrin and tumor growth [J].
Chaurasia, Pratima ;
Aguirre-Ghiso, Julio A. ;
Liang, Olin D. ;
Gardsvoll, Henrik ;
Ploug, Michael ;
Ossowski, Liliana .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2006, 281 (21) :14852-14863
[18]   Selective abrogation of the uPA-uPAR interaction in vivo reveals a novel role in suppression of fibrin-associated inflammation [J].
Connolly, Brian M. ;
Choi, Eun Young ;
Gardsvoll, Henrik ;
Bey, Alexandra L. ;
Currie, Brooke M. ;
Chavakis, Triantafyllos ;
Liu, Shihui ;
Molinolo, Alfredo ;
Ploug, Michael ;
Leppla, Stephen H. ;
Bugge, Thomas H. .
BLOOD, 2010, 116 (09) :1593-1603
[19]   ProtTest 3: fast selection of best-fit models of protein evolution [J].
Darriba, Diego ;
Taboada, Guillermo L. ;
Doallo, Ramon ;
Posada, David .
BIOINFORMATICS, 2011, 27 (08) :1164-1165
[20]   A phylogenomic framework and timescale for comparative studies of tunicates [J].
Delsuc, Frederic ;
Philippe, Herve ;
Tsagkogeorga, Georgia ;
Simion, Paul ;
Tilak, Marie-Ka ;
Turon, Xavier ;
Lopez-Legentil, Susanna ;
Piette, Jacques ;
Lemaire, Patrick ;
Douzery, Emmanuel J. P. .
BMC BIOLOGY, 2018, 16