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Atomic-resolution chemical characterization of (2x)72-kDa tryptophan synthase via four- and five-dimensional 1H-detected solid-state NMR
被引:33
作者:
Klein, Alexander
[1
,2
]
Rovo, Petra
[1
]
Sakhrani, Varun V.
[3
]
Wang, Yangyang
[3
]
Holmes, Jacob B.
[3
]
Liu, Viktoriia
[3
]
Skowronek, Patricia
[1
]
Kukuk, Laura
[2
]
Vasa, Suresh K.
[1
,2
]
Guentert, Peter
[4
,5
,6
]
Mueller, Leonard J.
[3
]
Linser, Rasmus
[1
,2
]
机构:
[1] Ludwig Maximilians Univ Munchen, Dept Chem & Pharm, D-81377 Munich, Germany
[2] TU Dortmund Univ, Dept Chem & Chem Biol, D-44227 Dortmund, Germany
[3] Univ Calif Riverside, Dept Chem, Riverside, CA 92521 USA
[4] Goethe Univ, Inst Biophys Chem, D-60438 Frankfurt, Germany
[5] Eidgenoss TH ETH Zurich, Lab Phys Chem, CH-8093 Zurich, Switzerland
[6] Tokyo Metropolitan Univ, Dept Chem, Tokyo 1920397, Japan
来源:
关键词:
solid-state NMR;
NMR crystallography;
tryptophan synthase;
PLP-dependent enzymes;
tautomerism;
ANGLE-SPINNING NMR;
H-1-H-1 DISTANCE RESTRAINTS;
FULLY PROTONATED PROTEINS;
BACKBONE ASSIGNMENT;
RESONANCE ASSIGNMENT;
PYRIDOXAL-PHOSPHATE;
SCHIFF-BASE;
SPECTROSCOPY;
CRYSTALLOGRAPHY;
DYNAMICS;
D O I:
10.1073/pnas.2114690119
中图分类号:
O [数理科学和化学];
P [天文学、地球科学];
Q [生物科学];
N [自然科学总论];
学科分类号:
07 ;
0710 ;
09 ;
摘要:
NMR chemical shifts provide detailed information on the chemical properties of molecules, thereby complementing structural data from techniques like X-ray crystallography and electron microscopy. Detailed analysis of protein NMR data, however, often hinges on comprehensive, site-specific assignment of backbone resonances, which becomes a bottleneck for molecular weights beyond 40 to 45 kDa. Here, we show that assignments for the (2x)72-kDa protein tryptophan synthase (665 amino acids per asymmetric unit) can be achieved via higher-dimensional, proton-detected, solid-state NMR using a single, 1-mg, uniformly labeled, microcrystalline sample. This framework grants access to atom-specific characterization of chemical properties and relaxation for the backbone and side chains, including those residues important for the catalytic turnover. Combined with first-principles calculations, the chemical shifts in the beta-subunit active site suggest a connection between active-site chemistry, the electrostatic environment, and catalytically important dynamics of the portal to the beta-subunit from solution.
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页数:9
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