Database resources of the national center for biotechnology information

被引：1090

作者：

Sayers, Eric W. ^{[1
]}

Bolton, Evan E. ^{[1
]}

Brister, J. Rodney ^{[1
]}

Canese, Kathi ^{[1
]}

Chan, Jessica ^{[1
]}

Comeau, Donald C. ^{[1
]}

Connor, Ryan ^{[1
]}

Funk, Kathryn ^{[1
]}

Kelly, Chris ^{[1
]}

Kim, Sunghwan ^{[1
]}

Madej, Tom ^{[1
]}

Marchler-Bauer, Aron ^{[1
]}

Lanczycki, Christopher ^{[1
]}

Lathrop, Stacy ^{[1
]}

Lu, Zhiyong ^{[1
]}

Thibaud-Nissen, Francoise ^{[1
]}

Murphy, Terence ^{[1
]}

Phan, Lon ^{[1
]}

Skripchenko, Yuri ^{[1
]}

Tse, Tony ^{[1
]}

Wang, Jiyao ^{[1
]}

Williams, Rebecca ^{[1
]}

Trawick, Barton W. ^{[1
]}

Pruitt, Kim D. ^{[1
]}

Sherry, Stephen T. ^{[1
]}

机构：

[1] NIH, Natl Ctr Biotechnol Informat, Natl Lib Med, Bldg 38A,8600 Rockville Pike, Bethesda, MD 20894 USA

来源：

NUCLEIC ACIDS RESEARCH | 2022年 / 50卷 / D1期

基金：

美国国家卫生研究院;

关键词：

UPDATE; ARCHIVE;

D O I：

10.1093/nar/gkab1112

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The National Center for Biotechnology Information (NCBI) produces a variety of online information resources for biology, including the GenBank (R) nucleic acid sequence database and the PubMed (R) database of citations and abstracts published in life science journals. NCBI provides search and retrieval operations for most of these data from 35 distinct databases. The E-utilities serve as the programming interface for the most of these databases. Resources receiving significant updates in the past year include PubMed, PMC, Bookshelf, RefSeq, SRA, Virus, dbSNP, dbVar, ClinicalTrials.gov, MMDB, iCn3D and PubChem.

引用

页码：D20 / D26

页数：7

共 25 条

[1] The international nucleotide sequence database collaboration [J].

Arita, Masanori ;

Karsch-Mizrachi, Ilene ;

Cochrane, Guy .

NUCLEIC ACIDS RESEARCH, 2021, 49 (D1) :D121-D124

[2] LitCovid: an open database of COVID-19 literature [J].

Chen, Qingyu ;

Allot, Alexis ;

Lu, Zhiyong .

NUCLEIC ACIDS RESEARCH, 2021, 49 (D1) :D1534-D1540

[3]

Chen QY, 2020, NATURE, V579, P193, DOI 10.1038/d41586-020-00694-1

[4] Best Match: New relevance search for PubMed [J].

Fiorini, Nicolas ;

Canese, Kathi ;

Starchenko, Grisha ;

Kireev, Evgeny ;

Kim, Won ;

Miller, Vadim ;

Osipov, Maxim ;

Kholodov, Michael ;

Ismagilov, Rafis ;

Mohan, Sunil ;

Ostell, James ;

Lu, Zhiyong .

PLOS BIOLOGY, 2018, 16 (08)

[5] PubChemRDF: towards the semantic annotation of PubChem compound and substance databases [J].

Fu, Gang ;

Batchelor, Colin ;

Dumontier, Michel ;

Hastings, Janna ;

Willighagen, Egon ;

Bolton, Evan .

JOURNAL OF CHEMINFORMATICS, 2015, 7

[6] DDBJ update: streamlining submission and access of human data [J].

Fukuda, Asami ;

Kodama, Yuichi ;

Mashima, Jun ;

Fujisawa, Takatomo ;

Ogasawara, Osamu .

NUCLEIC ACIDS RESEARCH, 2021, 49 (D1) :D71-D75

[7] The European Nucleotide Archive in 2020 [J].

Harrison, Peter W. ;

Ahamed, Alisha ;

Aslam, Raheela ;

Alako, Blaise T. F. ;

Burgin, Josephine ;

Buso, Nicola ;

Courtot, Melanie ;

Fan, Jun ;

Gupta, Dipayan ;

Haseeb, Muhammad ;

Holt, Sam ;

Ibrahim, Talal ;

Ivanov, Eugene ;

Jayathilaka, Suran ;

Kadhirvelu, Vishnukumar Balavenkataraman ;

Kumar, Manish ;

Lopez, Rodrigo ;

Kay, Simon ;

Leinonen, Rasko ;

Liu, Xin ;

O'Cathail, Colman ;

Pakseresht, Amir ;

Park, Youngmi ;

Pesant, Stephane ;

Rahman, Nadim ;

Rajan, Jeena ;

Sokolov, Alexey ;

Vijayaraja, Senthilnathan ;

Waheed, Zahra ;

Zyoud, Ahmad ;

Burdett, Tony ;

Cochrane, Guy .

NUCLEIC ACIDS RESEARCH, 2021, 49 (D1) :D82-D85

[8] SPDI: data model for variants and applications at NCBI [J].

Holmes, J. Bradley ;

Moyer, Eric ;

Phan, Lon ;

Maglott, Donna ;

Kattman, Brandi .

BIOINFORMATICS, 2020, 36 (06) :1902-1907

[9] STAT: a fast, scalable, MinHash-based k-mer tool to assess Sequence Read Archive next-generation sequence submissions [J].

Katz, Kenneth S. ;

Shutov, Oleg ;

Lapoint, Richard ;

Kimelman, Michael ;

Brister, J. Rodney ;

O'Sullivan, Christopher .

GENOME BIOLOGY, 2021, 22 (01)

[10] PubChem in 2021: new data content and improved web interfaces [J].

Kim, Sunghwan ;

Chen, Jie ;

Cheng, Tiejun ;

Gindulyte, Asta ;

He, Jia ;

He, Siqian ;

Li, Qingliang ;

Shoemaker, Benjamin A. ;

Thiessen, Paul A. ;

Yu, Bo ;

Zaslavsky, Leonid ;

Zhang, Jian ;

Bolton, Evan E. .

NUCLEIC ACIDS RESEARCH, 2021, 49 (D1) :D1388-D1395

← 1 2 3 →