Applications of CRISPR/Cas13-Based RNA Editing in Plants

被引:26
|
作者
Kavuri, Naga Rajitha [1 ,2 ]
Ramasamy, Manikandan [1 ]
Qi, Yiping [3 ,4 ]
Mandadi, Kranthi [1 ,2 ,5 ]
机构
[1] Texas A&M Univ Syst, Texas A&M AgriLife Res & Extens Ctr, 2415 E Highway 83, Weslaco, TX 78596 USA
[2] Texas A&M Univ Syst, Dept Plant Pathol & Microbiol, 2132 TAMU, College Stn, TX 77843 USA
[3] Univ Maryland, Dept Plant Sci & Landscape Architecture, College Pk, MD 20742 USA
[4] Univ Maryland, Inst Biosci & Biotechnol Res, Rockville, MD 20850 USA
[5] Texas A&M AgriLife, Inst Adv Hlth Agr, College Stn, TX 77845 USA
关键词
type VI CRISPR systems; CRISPR; Cas13; RNA targeting; RNA editing; RNA interference; NUCLEIC-ACID DETECTION; CLASSIFICATION; KNOCKDOWN; DIVERSITY; EVOLUTION; SYSTEM; GENES; RICE;
D O I
10.3390/cells11172665
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
The Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)/CRISPR-associated (Cas) system is widely used as a genome-editing tool in various organisms, including plants, to elucidate the fundamental understanding of gene function, disease diagnostics, and crop improvement. Among the CRISPR/Cas systems, Cas9 is one of the widely used nucleases for DNA modifications, but manipulation of RNA at the post-transcriptional level is limited. The recently identified type VI CRISPR/Cas systems provide a platform for precise RNA manipulation without permanent changes to the genome. Several studies reported efficient application of Cas13 in RNA studies, such as viral interference, RNA knockdown, and RNA detection in various organisms. Cas13 was also used to produce virus resistance in plants, as most plant viruses are RNA viruses. However, the application of CRISPR/Cas13 to studies of plant RNA biology is still in its infancy. This review discusses the current and prospective applications of CRISPR/Cas13-based RNA editing technologies in plants.
引用
收藏
页数:11
相关论文
共 50 条
  • [1] RNA editing with CRISPR-Cas13
    Cox, David B. T.
    Gootenberg, Jonathan S.
    Abudayyeh, Omar O.
    Franklin, Brian
    Kellner, Max J.
    Joung, Julia
    Zhang, Feng
    SCIENCE, 2017, 358 (6366) : 1019 - 1027
  • [2] Commentary: RNA editing with CRISPR-Cas13
    Matsoukas, Ianis G.
    FRONTIERS IN GENETICS, 2018, 9
  • [3] Development and Evaluation of Rapid and Accurate CRISPR/Cas13-Based RNA Diagnostics for Pneumocystis jirovecii Pneumonia
    Zhan, Yangqing
    Gao, Xiaoqing
    Li, Shaoqiang
    Si, Yeqi
    Li, Yuanxiang
    Han, Xu
    Sun, Wenjun
    Li, Zhengtu
    Ye, Feng
    FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2022, 12
  • [4] CRISPR/Cas13-based detection and silencing of cancer fusion oncogenes
    Puig-Serra, P.
    Martinez-Lage, M.
    Casado-Rosas, M. C.
    Olalla-Sastre, B.
    Alonso-Yanez, A.
    Nieto-Sanchez, A.
    Miguez-Amil, S.
    Lopez-Valls, M.
    Diaz-Martin, J.
    De Alava, E.
    Sot-Sanz, B.
    Fernandez-Leiro, R.
    Torres-Ruiz, R.
    Rodriguez-Perales, S.
    HUMAN GENE THERAPY, 2022, 33 (23-24) : A191 - A191
  • [5] CRISPR/Cas13-Based Approaches for Ultrasensitive and Specific Detection of microRNAs
    Granados-Riveron, Javier T.
    Aquino-Jarquin, Guillermo
    CELLS, 2021, 10 (07)
  • [6] Programmable RNA base editing with photoactivatable CRISPR-Cas13
    Yu, Jeonghye
    Shin, Jongpil
    Yu, Jihwan
    Kim, Jihye
    Yu, Daseuli
    Heo, Won Do
    NATURE COMMUNICATIONS, 2024, 15 (01)
  • [7] Programmable RNA base editing with photoactivatable CRISPR-Cas13
    Jeonghye Yu
    Jongpil Shin
    Jihwan Yu
    Jihye Kim
    Daseuli Yu
    Won Do Heo
    Nature Communications, 15
  • [8] RNA Editing for Usher Syndrome Using CRISPR-Cas13
    Fry, Lewis E.
    Barnard, Alun R.
    McClements, Michelle E.
    MacLaren, Robert E.
    MOLECULAR THERAPY, 2020, 28 (04) : 478 - 479
  • [9] CRISPR/Cas13a targeting of RNA virus in plants
    Kul Bhushan
    Plant Cell Reports, 2018, 37 : 1707 - 1712
  • [10] CRISPR/Cas13a targeting of RNA virus in plants
    Chaudhary, Kulbhushan
    PLANT CELL REPORTS, 2018, 37 (12) : 1707 - 1712