Isothermal titration calorimetry of ion-coupled membrane transporters

被引:20
作者
Boudker, Olga [1 ]
Oh, SeCheol [1 ]
机构
[1] Weill Cornell Med Coll, Dept Physiol & Biophys, New York, NY 10021 USA
关键词
Isothermal titration calorimetry; Thermodynamic linkage; Membrane proteins; Ion-coupled; Transporters; Thermodynamics; Heat capacity; HEAT-CAPACITY CHANGES; LIGAND-BINDING; THERMODYNAMIC CHARACTERIZATION; PROTEIN INTERACTIONS; SELECTIVITY FILTER; SUBSTRATE-BINDING; VANT-HOFF; TEMPERATURE; ENERGETICS; HOMOLOG;
D O I
10.1016/j.ymeth.2015.01.012
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Binding of ligands, ranging from proteins to ions, to membrane proteins is associated with absorption or release of heat that can be detected by isothermal titration calorimetry (ITC). Such measurements not only provide binding affinities but also afford direct access to thermodynamic parameters of binding enthalpy, entropy and heat capacity. These parameters can be interpreted in a structural context, allow discrimination between different binding mechanisms and guide drug design. In this review, we introduce advantages and limitations of ITC as a methodology to study molecular interactions of membrane proteins. We further describe case studies where ITC was used to analyze thermodynamic linkage between ions and substrates in ion-coupled transporters. Similar type of linkage analysis will likely be applicable to a wide range of transporters, channels, and receptors. (C) 2015 Elsevier Inc. All rights reserved.
引用
收藏
页码:171 / 182
页数:12
相关论文
共 106 条
[1]   Separate ion pathways in a Cl+/H+ exchanger [J].
Accardi, A ;
Walden, M ;
Nguitragool, W ;
Jayaram, H ;
Williams, C ;
Miller, C .
JOURNAL OF GENERAL PHYSIOLOGY, 2005, 126 (06) :563-570
[2]   Secondary active transport mediated by a prokaryotic homologue of ClC Cl- channels [J].
Accardi, A ;
Miller, C .
NATURE, 2004, 427 (6977) :803-807
[3]   CLC channels and transporters: Proteins with borderline personalities [J].
Accardi, Alessio ;
Picollo, Alessandra .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES, 2010, 1798 (08) :1457-1464
[4]   Transport dynamics in a glutamate transporter homologue [J].
Akyuz, Nurunisa ;
Altman, Roger B. ;
Blanchard, Scott C. ;
Boudker, Olga .
NATURE, 2013, 502 (7469) :114-+
[5]   Evaluation of linked protonation effects in protein binding reactions using isothermal titration calorimetry [J].
Baker, BM ;
Murphy, KP .
BIOPHYSICAL JOURNAL, 1996, 71 (04) :2049-2055
[6]   Conformational changes required for H+/Cl- exchange mediated by a CLC transporter [J].
Basilio, Daniel ;
Noack, Kristin ;
Picollo, Alessandra ;
Accardi, Alessio .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2014, 21 (05) :456-463
[7]   Calorimetry of enzyme-catalyzed reactions [J].
Bianconi, M. Lucia .
BIOPHYSICAL CHEMISTRY, 2007, 126 (1-3) :59-64
[8]   What can isothermal titration microcalorimetry experiments tell us about the self-organization of surfactants into micelles? [J].
Bouchemal, Kawthar ;
Agnely, Florence ;
Koffi, Armand ;
Djabourov, Madeleine ;
Ponchel, Gilles .
JOURNAL OF MOLECULAR RECOGNITION, 2010, 23 (04) :335-342
[9]   Coupling substrate and ion binding to extracellular gate of a sodium-dependent aspartate transporter [J].
Boudker, Olga ;
Ryan, Renae M. ;
Yernool, Dinesh ;
Shimamoto, Keiko ;
Gouaux, Eric .
NATURE, 2007, 445 (7126) :387-393
[10]  
BRADFORD MM, 1976, ANAL BIOCHEM, V72, P248, DOI 10.1016/0003-2697(76)90527-3